Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
TfamP40630 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
TfamP40630 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TfamP40630 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TfamP40630 Gm45416-201ENSMUST00000209713 2201 ntBASIC10.97□□□□□ -0.65
TfamP40630 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
TfamP40630 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
TfamP40630 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
TfamP40630 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC10.97□□□□□ -0.65
TfamP40630 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TfamP40630 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
TfamP40630 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
TfamP40630 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TfamP40630 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
TfamP40630 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
TfamP40630 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
TfamP40630 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC10.97□□□□□ -0.65
TfamP40630 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC10.97□□□□□ -0.65
TfamP40630 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC10.97□□□□□ -0.65
TfamP40630 Gm8459-201ENSMUST00000162504 760 ntBASIC10.97□□□□□ -0.65
TfamP40630 H2-Q3-201ENSMUST00000172583 608 ntBASIC10.97□□□□□ -0.65
TfamP40630 Gm18734-201ENSMUST00000172937 808 ntBASIC10.97□□□□□ -0.65
TfamP40630 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TfamP40630 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.65
TfamP40630 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC10.97□□□□□ -0.65
TfamP40630 AC160929.1-201ENSMUST00000221247 415 ntBASIC10.97□□□□□ -0.65
TfamP40630 CT009713.10-202ENSMUST00000225734 696 ntBASIC10.97□□□□□ -0.65
TfamP40630 AC112945.1-201ENSMUST00000226413 514 ntBASIC10.97□□□□□ -0.65
TfamP40630 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
TfamP40630 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
TfamP40630 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
TfamP40630 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
TfamP40630 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
TfamP40630 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
TfamP40630 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
TfamP40630 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC10.97□□□□□ -0.65
TfamP40630 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
TfamP40630 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
TfamP40630 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
TfamP40630 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
TfamP40630 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TfamP40630 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
TfamP40630 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
TfamP40630 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
TfamP40630 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TfamP40630 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
TfamP40630 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TfamP40630 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
TfamP40630 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.65
TfamP40630 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
TfamP40630 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
TfamP40630 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
TfamP40630 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TfamP40630 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
TfamP40630 BC043934-202ENSMUST00000185694 2356 ntBASIC10.96□□□□□ -0.65
TfamP40630 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC10.96□□□□□ -0.65
TfamP40630 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
TfamP40630 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TfamP40630 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TfamP40630 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
TfamP40630 Gm5740-201ENSMUST00000211003 1857 ntBASIC10.96□□□□□ -0.65
TfamP40630 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
TfamP40630 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC10.96□□□□□ -0.65
TfamP40630 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TfamP40630 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TfamP40630 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TfamP40630 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TfamP40630 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TfamP40630 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
TfamP40630 Gm14208-201ENSMUST00000119645 678 ntBASIC10.96□□□□□ -0.65
TfamP40630 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.65
TfamP40630 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
TfamP40630 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC10.96□□□□□ -0.65
TfamP40630 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
TfamP40630 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TfamP40630 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
TfamP40630 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TfamP40630 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
TfamP40630 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TfamP40630 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TfamP40630 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TfamP40630 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
TfamP40630 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
TfamP40630 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
TfamP40630 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
TfamP40630 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
TfamP40630 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
TfamP40630 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
TfamP40630 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
TfamP40630 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
TfamP40630 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
TfamP40630 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC10.96□□□□□ -0.66
TfamP40630 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
TfamP40630 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC10.96□□□□□ -0.66
TfamP40630 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
TfamP40630 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
TfamP40630 AC166359.1-201ENSMUST00000220243 1871 ntBASIC10.95□□□□□ -0.66
TfamP40630 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
TfamP40630 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
TfamP40630 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms