Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Gm24844-201ENSMUST00000158679 127 ntBASIC9.35□□□□□ -0.91
Timp3P39876 Gm3150-201ENSMUST00000166418 204 ntBASIC9.35□□□□□ -0.91
Timp3P39876 Gm6548-201ENSMUST00000167498 1165 ntBASIC9.35□□□□□ -0.91
Timp3P39876 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Timp3P39876 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Timp3P39876 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Timp3P39876 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC9.35□□□□□ -0.91
Timp3P39876 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC9.35□□□□□ -0.91
Timp3P39876 Gm10807-201ENSMUST00000177134 795 ntBASIC9.35□□□□□ -0.91
Timp3P39876 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC9.35□□□□□ -0.91
Timp3P39876 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Timp3P39876 Gm4654-201ENSMUST00000183305 982 ntBASIC9.35□□□□□ -0.91
Timp3P39876 Gm28937-201ENSMUST00000185413 695 ntBASIC9.35□□□□□ -0.91
Timp3P39876 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Timp3P39876 Gm29400-201ENSMUST00000187208 695 ntBASIC9.35□□□□□ -0.91
Timp3P39876 Gm28662-201ENSMUST00000188446 695 ntBASIC9.35□□□□□ -0.91
Timp3P39876 Gm28251-201ENSMUST00000188835 695 ntBASIC9.35□□□□□ -0.91
Timp3P39876 Gm37318-201ENSMUST00000194325 695 ntBASIC9.35□□□□□ -0.91
Timp3P39876 Gm38017-201ENSMUST00000194768 695 ntBASIC9.35□□□□□ -0.91
Timp3P39876 Gm37287-201ENSMUST00000195449 695 ntBASIC9.35□□□□□ -0.91
Timp3P39876 Gm37793-201ENSMUST00000195548 695 ntBASIC9.35□□□□□ -0.91
Timp3P39876 Gm9645-201ENSMUST00000197131 792 ntBASIC9.35□□□□□ -0.91
Timp3P39876 Gm8365-201ENSMUST00000197334 648 ntBASIC9.35□□□□□ -0.91
Timp3P39876 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Timp3P39876 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC9.35□□□□□ -0.91
Timp3P39876 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Timp3P39876 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC9.35□□□□□ -0.91
Timp3P39876 Gm7940-201ENSMUST00000218195 769 ntBASIC9.35□□□□□ -0.91
Timp3P39876 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC9.35□□□□□ -0.91
Timp3P39876 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Timp3P39876 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC9.35□□□□□ -0.91
Timp3P39876 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC9.35□□□□□ -0.91
Timp3P39876 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Timp3P39876 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Timp3P39876 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Timp3P39876 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Timp3P39876 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Timp3P39876 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Timp3P39876 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Timp3P39876 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Timp3P39876 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Timp3P39876 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Timp3P39876 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Timp3P39876 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Timp3P39876 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Timp3P39876 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Timp3P39876 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC9.35□□□□□ -0.91
Timp3P39876 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Timp3P39876 AC154314.2-201ENSMUST00000223677 3502 ntBASIC9.35□□□□□ -0.91
Timp3P39876 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Timp3P39876 Timd2-202ENSMUST00000109225 2236 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Timp3P39876 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Timp3P39876 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Timp3P39876 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Timp3P39876 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Timp3P39876 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Timp3P39876 Gm45428-201ENSMUST00000209619 1789 ntBASIC9.35□□□□□ -0.91
Timp3P39876 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC9.34□□□□□ -0.91
Timp3P39876 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Timp3P39876 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Timp3P39876 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC9.34□□□□□ -0.91
Timp3P39876 AC158355.1-201ENSMUST00000215895 1705 ntBASIC9.34□□□□□ -0.91
Timp3P39876 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Timp3P39876 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Timp3P39876 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Timp3P39876 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Timp3P39876 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Timp3P39876 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Timp3P39876 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC9.34□□□□□ -0.91
Timp3P39876 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Timp3P39876 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Timp3P39876 Gm11949-201ENSMUST00000117640 372 ntBASIC9.34□□□□□ -0.91
Timp3P39876 Gm11451-201ENSMUST00000118946 630 ntBASIC9.34□□□□□ -0.91
Timp3P39876 Gm15725-201ENSMUST00000119947 1090 ntBASIC9.34□□□□□ -0.91
Timp3P39876 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC9.34□□□□□ -0.91
Timp3P39876 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC9.34□□□□□ -0.91
Timp3P39876 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Timp3P39876 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC9.34□□□□□ -0.91
Timp3P39876 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC9.34□□□□□ -0.91
Timp3P39876 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC9.34□□□□□ -0.91
Timp3P39876 Gm22442-201ENSMUST00000157256 144 ntBASIC9.34□□□□□ -0.91
Timp3P39876 Gm6485-201ENSMUST00000160676 439 ntBASIC9.34□□□□□ -0.91
Timp3P39876 Gm9192-201ENSMUST00000183221 985 ntBASIC9.34□□□□□ -0.91
Timp3P39876 Gm27910-201ENSMUST00000185004 107 ntBASIC9.34□□□□□ -0.91
Timp3P39876 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC9.34□□□□□ -0.91
Timp3P39876 Gm3551-201ENSMUST00000190750 664 ntBASIC9.34□□□□□ -0.91
Timp3P39876 Gm38151-201ENSMUST00000195085 289 ntBASIC9.34□□□□□ -0.91
Timp3P39876 Gm5542-201ENSMUST00000195485 1089 ntBASIC9.34□□□□□ -0.91
Timp3P39876 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Timp3P39876 Gm44980-201ENSMUST00000205826 314 ntBASIC9.34□□□□□ -0.91
Timp3P39876 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Timp3P39876 Gm7600-201ENSMUST00000209657 785 ntBASIC9.34□□□□□ -0.91
Timp3P39876 AC129219.2-201ENSMUST00000224324 701 ntBASIC9.34□□□□□ -0.91
Timp3P39876 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Timp3P39876 Snora73b-201ENSMUST00000083419 205 ntBASIC9.34□□□□□ -0.91
Timp3P39876 Gm44152-201ENSMUST00000205007 1691 ntBASIC9.34□□□□□ -0.91
Timp3P39876 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC9.34□□□□□ -0.91
Timp3P39876 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Timp3P39876 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC9.34□□□□□ -0.91
Timp3P39876 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms