Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sftpa1P35242 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sftpa1P35242 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Sftpa1P35242 Gm22937-201ENSMUST00000103954 131 ntBASIC10.49□□□□□ -0.73
Sftpa1P35242 Gm14034-201ENSMUST00000120147 551 ntBASIC10.49□□□□□ -0.73
Sftpa1P35242 Gm14052-201ENSMUST00000121434 1031 ntBASIC10.49□□□□□ -0.73
Sftpa1P35242 Gm16459-201ENSMUST00000121443 686 ntBASIC10.49□□□□□ -0.73
Sftpa1P35242 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Sftpa1P35242 Gm25569-201ENSMUST00000157175 131 ntBASIC10.49□□□□□ -0.73
Sftpa1P35242 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC10.49□□□□□ -0.73
Sftpa1P35242 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sftpa1P35242 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC10.49□□□□□ -0.73
Sftpa1P35242 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sftpa1P35242 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC10.49□□□□□ -0.73
Sftpa1P35242 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Sftpa1P35242 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Sftpa1P35242 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Sftpa1P35242 Ndufc1-204ENSMUST00000193279 315 ntAPPRIS P1 TSL 3 BASIC10.49□□□□□ -0.73
Sftpa1P35242 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC10.49□□□□□ -0.73
Sftpa1P35242 Gm7238-201ENSMUST00000206467 973 ntBASIC10.49□□□□□ -0.73
Sftpa1P35242 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC10.49□□□□□ -0.73
Sftpa1P35242 Gm45481-201ENSMUST00000209717 877 ntBASIC10.49□□□□□ -0.73
Sftpa1P35242 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Sftpa1P35242 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC10.49□□□□□ -0.73
Sftpa1P35242 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC10.49□□□□□ -0.73
Sftpa1P35242 Gm40910-202ENSMUST00000223077 569 ntTSL 5 BASIC10.49□□□□□ -0.73
Sftpa1P35242 AC174797.2-201ENSMUST00000225835 165 ntBASIC10.49□□□□□ -0.73
Sftpa1P35242 AC105408.1-201ENSMUST00000227771 802 ntBASIC10.49□□□□□ -0.73
Sftpa1P35242 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sftpa1P35242 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Sftpa1P35242 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sftpa1P35242 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Sftpa1P35242 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sftpa1P35242 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sftpa1P35242 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sftpa1P35242 CT573086.2-201ENSMUST00000227277 4992 ntBASIC10.49□□□□□ -0.73
Sftpa1P35242 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sftpa1P35242 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Sftpa1P35242 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Sftpa1P35242 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sftpa1P35242 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sftpa1P35242 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
Sftpa1P35242 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sftpa1P35242 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sftpa1P35242 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sftpa1P35242 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sftpa1P35242 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sftpa1P35242 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Sftpa1P35242 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sftpa1P35242 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC10.49□□□□□ -0.73
Sftpa1P35242 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sftpa1P35242 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
Sftpa1P35242 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sftpa1P35242 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC10.48□□□□□ -0.73
Sftpa1P35242 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sftpa1P35242 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Sftpa1P35242 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sftpa1P35242 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC10.48□□□□□ -0.73
Sftpa1P35242 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC10.48□□□□□ -0.73
Sftpa1P35242 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC10.48□□□□□ -0.73
Sftpa1P35242 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sftpa1P35242 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sftpa1P35242 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sftpa1P35242 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sftpa1P35242 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Sftpa1P35242 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sftpa1P35242 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sftpa1P35242 Pex5l-203ENSMUST00000108221 1187 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Sftpa1P35242 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Sftpa1P35242 Gm11475-201ENSMUST00000118482 476 ntBASIC10.48□□□□□ -0.73
Sftpa1P35242 Gm8302-201ENSMUST00000119217 852 ntBASIC10.48□□□□□ -0.73
Sftpa1P35242 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Sftpa1P35242 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC10.48□□□□□ -0.73
Sftpa1P35242 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Sftpa1P35242 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC10.48□□□□□ -0.73
Sftpa1P35242 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
Sftpa1P35242 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC10.48□□□□□ -0.73
Sftpa1P35242 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Sftpa1P35242 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC10.48□□□□□ -0.73
Sftpa1P35242 Mir6973a-201ENSMUST00000183646 78 ntBASIC10.48□□□□□ -0.73
Sftpa1P35242 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC10.48□□□□□ -0.73
Sftpa1P35242 Ighv1-60-201ENSMUST00000195816 405 ntBASIC10.48□□□□□ -0.73
Sftpa1P35242 Gm18010-201ENSMUST00000203553 202 ntBASIC10.48□□□□□ -0.73
Sftpa1P35242 Gm7192-201ENSMUST00000210793 1137 ntBASIC10.48□□□□□ -0.73
Sftpa1P35242 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC10.48□□□□□ -0.73
Sftpa1P35242 BC049987-201ENSMUST00000213859 918 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Sftpa1P35242 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC10.48□□□□□ -0.73
Sftpa1P35242 CT025689.1-201ENSMUST00000225214 283 ntBASIC10.48□□□□□ -0.73
Sftpa1P35242 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Sftpa1P35242 Prok2-201ENSMUST00000008273 594 ntTSL 3 BASIC10.48□□□□□ -0.73
Sftpa1P35242 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Sftpa1P35242 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Sftpa1P35242 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sftpa1P35242 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sftpa1P35242 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Sftpa1P35242 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sftpa1P35242 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sftpa1P35242 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Sftpa1P35242 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Sftpa1P35242 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms