Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pde6bP23440 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Pde6bP23440 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pde6bP23440 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pde6bP23440 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pde6bP23440 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Pde6bP23440 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pde6bP23440 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pde6bP23440 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pde6bP23440 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pde6bP23440 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pde6bP23440 Mir124a-1hg-201ENSMUST00000180610 4103 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Pde6bP23440 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Pde6bP23440 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pde6bP23440 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Pde6bP23440 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pde6bP23440 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pde6bP23440 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pde6bP23440 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pde6bP23440 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pde6bP23440 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pde6bP23440 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Pde6bP23440 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pde6bP23440 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pde6bP23440 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pde6bP23440 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Pde6bP23440 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Pde6bP23440 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC12.45□□□□□ -0.42
Pde6bP23440 Gm11422-201ENSMUST00000118925 1103 ntBASIC12.45□□□□□ -0.42
Pde6bP23440 Gm13117-201ENSMUST00000120894 691 ntBASIC12.45□□□□□ -0.42
Pde6bP23440 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pde6bP23440 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC12.45□□□□□ -0.42
Pde6bP23440 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pde6bP23440 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC12.45□□□□□ -0.42
Pde6bP23440 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.45□□□□□ -0.42
Pde6bP23440 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC12.45□□□□□ -0.42
Pde6bP23440 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC12.45□□□□□ -0.42
Pde6bP23440 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC12.45□□□□□ -0.42
Pde6bP23440 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC12.45□□□□□ -0.42
Pde6bP23440 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Pde6bP23440 Gm42816-201ENSMUST00000198433 325 ntBASIC12.45□□□□□ -0.42
Pde6bP23440 Gm5996-201ENSMUST00000211110 718 ntBASIC12.45□□□□□ -0.42
Pde6bP23440 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pde6bP23440 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pde6bP23440 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Pde6bP23440 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Pde6bP23440 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pde6bP23440 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Pde6bP23440 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pde6bP23440 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pde6bP23440 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Pde6bP23440 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Pde6bP23440 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pde6bP23440 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pde6bP23440 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pde6bP23440 Gm18642-201ENSMUST00000206642 1400 ntBASIC12.45□□□□□ -0.42
Pde6bP23440 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pde6bP23440 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pde6bP23440 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pde6bP23440 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pde6bP23440 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Pde6bP23440 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Pde6bP23440 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pde6bP23440 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pde6bP23440 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC12.44□□□□□ -0.42
Pde6bP23440 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Pde6bP23440 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Pde6bP23440 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pde6bP23440 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pde6bP23440 Gm14807-201ENSMUST00000116640 983 ntBASIC12.44□□□□□ -0.42
Pde6bP23440 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Pde6bP23440 Gm10169-201ENSMUST00000121822 348 ntBASIC12.44□□□□□ -0.42
Pde6bP23440 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC12.44□□□□□ -0.42
Pde6bP23440 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC12.44□□□□□ -0.42
Pde6bP23440 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC12.44□□□□□ -0.42
Pde6bP23440 Gm9135-201ENSMUST00000182963 990 ntBASIC12.44□□□□□ -0.42
Pde6bP23440 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Pde6bP23440 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC12.44□□□□□ -0.42
Pde6bP23440 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pde6bP23440 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Pde6bP23440 AC114645.1-201ENSMUST00000215831 187 ntBASIC12.44□□□□□ -0.42
Pde6bP23440 Gm6991-201ENSMUST00000218475 1178 ntBASIC12.44□□□□□ -0.42
Pde6bP23440 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC12.44□□□□□ -0.42
Pde6bP23440 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pde6bP23440 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pde6bP23440 Gm5805-201ENSMUST00000072779 456 ntBASIC12.44□□□□□ -0.42
Pde6bP23440 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pde6bP23440 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC12.44□□□□□ -0.42
Pde6bP23440 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pde6bP23440 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pde6bP23440 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pde6bP23440 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pde6bP23440 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pde6bP23440 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
Pde6bP23440 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pde6bP23440 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pde6bP23440 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pde6bP23440 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pde6bP23440 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pde6bP23440 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms