Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
BdnfP21237 Avil-203ENSMUST00000129173 2925 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
BdnfP21237 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
BdnfP21237 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
BdnfP21237 AC160340.2-201ENSMUST00000220812 3675 ntBASIC10.92□□□□□ -0.66
BdnfP21237 Cd8a-201ENSMUST00000066747 3128 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
BdnfP21237 Gm43143-201ENSMUST00000196083 2023 ntBASIC10.92□□□□□ -0.66
BdnfP21237 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
BdnfP21237 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
BdnfP21237 Cep57l1-209ENSMUST00000189770 2232 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
BdnfP21237 AC160562.2-201ENSMUST00000216374 2201 ntTSL 2 BASIC10.92□□□□□ -0.66
BdnfP21237 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
BdnfP21237 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
BdnfP21237 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
BdnfP21237 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
BdnfP21237 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
BdnfP21237 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
BdnfP21237 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
BdnfP21237 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
BdnfP21237 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
BdnfP21237 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC10.92□□□□□ -0.66
BdnfP21237 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
BdnfP21237 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
BdnfP21237 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
BdnfP21237 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
BdnfP21237 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
BdnfP21237 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
BdnfP21237 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC10.91□□□□□ -0.66
BdnfP21237 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
BdnfP21237 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
BdnfP21237 Gm37954-201ENSMUST00000195400 2071 ntBASIC10.91□□□□□ -0.66
BdnfP21237 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
BdnfP21237 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
BdnfP21237 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
BdnfP21237 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
BdnfP21237 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
BdnfP21237 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC10.91□□□□□ -0.66
BdnfP21237 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC10.91□□□□□ -0.66
BdnfP21237 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
BdnfP21237 Gm11509-201ENSMUST00000117358 325 ntBASIC10.91□□□□□ -0.66
BdnfP21237 Gm13350-201ENSMUST00000120519 479 ntBASIC10.91□□□□□ -0.66
BdnfP21237 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
BdnfP21237 Gm26361-201ENSMUST00000158868 186 ntBASIC10.91□□□□□ -0.66
BdnfP21237 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
BdnfP21237 Gm34767-201ENSMUST00000191813 1062 ntBASIC10.91□□□□□ -0.66
BdnfP21237 Gm42629-201ENSMUST00000199063 1102 ntBASIC10.91□□□□□ -0.66
BdnfP21237 Gm6450-201ENSMUST00000200896 574 ntBASIC10.91□□□□□ -0.66
BdnfP21237 Gm8913-201ENSMUST00000209491 641 ntBASIC10.91□□□□□ -0.66
BdnfP21237 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
BdnfP21237 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
BdnfP21237 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
BdnfP21237 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
BdnfP21237 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
BdnfP21237 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC10.91□□□□□ -0.66
BdnfP21237 Tnip1-205ENSMUST00000108886 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
BdnfP21237 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
BdnfP21237 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
BdnfP21237 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
BdnfP21237 Mitf-201ENSMUST00000043628 1921 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
BdnfP21237 Serpinb1a-201ENSMUST00000076352 1918 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
BdnfP21237 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
BdnfP21237 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
BdnfP21237 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC10.91□□□□□ -0.66
BdnfP21237 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
BdnfP21237 AC154171.3-201ENSMUST00000224519 2505 ntBASIC10.91□□□□□ -0.66
BdnfP21237 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC10.91□□□□□ -0.66
BdnfP21237 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
BdnfP21237 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
BdnfP21237 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
BdnfP21237 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
BdnfP21237 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
BdnfP21237 Gm14150-201ENSMUST00000122404 1354 ntBASIC10.9□□□□□ -0.66
BdnfP21237 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
BdnfP21237 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
BdnfP21237 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
BdnfP21237 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC10.9□□□□□ -0.66
BdnfP21237 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
BdnfP21237 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
BdnfP21237 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC10.9□□□□□ -0.66
BdnfP21237 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
BdnfP21237 Gm43488-201ENSMUST00000198874 2504 ntBASIC10.9□□□□□ -0.66
BdnfP21237 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
BdnfP21237 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
BdnfP21237 Gm37873-201ENSMUST00000194571 2280 ntBASIC10.9□□□□□ -0.66
BdnfP21237 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
BdnfP21237 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
BdnfP21237 Gm11500-201ENSMUST00000118237 601 ntBASIC10.9□□□□□ -0.66
BdnfP21237 Gm13665-201ENSMUST00000120830 528 ntBASIC10.9□□□□□ -0.66
BdnfP21237 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
BdnfP21237 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC10.9□□□□□ -0.66
BdnfP21237 Gm3329-201ENSMUST00000159873 556 ntBASIC10.9□□□□□ -0.66
BdnfP21237 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC10.9□□□□□ -0.66
BdnfP21237 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC10.9□□□□□ -0.66
BdnfP21237 Gm5616-201ENSMUST00000165252 384 ntBASIC10.9□□□□□ -0.66
BdnfP21237 Gm8741-201ENSMUST00000174736 384 ntBASIC10.9□□□□□ -0.66
BdnfP21237 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC10.9□□□□□ -0.66
BdnfP21237 Gm25890-201ENSMUST00000177643 165 ntBASIC10.9□□□□□ -0.66
BdnfP21237 Rnu1b2-201ENSMUST00000178073 165 ntBASIC10.9□□□□□ -0.66
BdnfP21237 Rnu1b1-201ENSMUST00000178250 165 ntBASIC10.9□□□□□ -0.66
BdnfP21237 Gm22614-201ENSMUST00000178300 165 ntBASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms