Protein–RNA interactions for Protein: P04213

T-cell receptor beta chain V region C5 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04213 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
P04213 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC10.85□□□□□ -0.67
P04213 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
P04213 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
P04213 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
P04213 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
P04213 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
P04213 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
P04213 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P04213 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P04213 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P04213 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
P04213 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC10.84□□□□□ -0.67
P04213 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
P04213 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
P04213 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P04213 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P04213 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P04213 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P04213 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P04213 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC10.84□□□□□ -0.67
P04213 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
P04213 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P04213 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
P04213 n-R5s64-201ENSMUST00000102019 119 ntBASIC10.84□□□□□ -0.67
P04213 Gm22920-201ENSMUST00000102175 109 ntBASIC10.84□□□□□ -0.67
P04213 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
P04213 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
P04213 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
P04213 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
P04213 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC10.84□□□□□ -0.67
P04213 Gm11941-201ENSMUST00000119904 610 ntBASIC10.84□□□□□ -0.67
P04213 Gm13328-201ENSMUST00000120816 1020 ntBASIC10.84□□□□□ -0.67
P04213 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
P04213 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC10.84□□□□□ -0.67
P04213 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P04213 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P04213 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC10.84□□□□□ -0.67
P04213 Gm18539-201ENSMUST00000204745 1090 ntBASIC10.84□□□□□ -0.67
P04213 Gm44506-201ENSMUST00000206278 965 ntBASIC10.84□□□□□ -0.67
P04213 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC10.84□□□□□ -0.67
P04213 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
P04213 Gm1821-202ENSMUST00000227415 750 ntBASIC10.84□□□□□ -0.67
P04213 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P04213 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
P04213 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
P04213 Olfr584-201ENSMUST00000098210 964 ntBASIC10.84□□□□□ -0.67
P04213 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC10.84□□□□□ -0.67
P04213 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC10.84□□□□□ -0.67
P04213 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC10.84□□□□□ -0.67
P04213 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P04213 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P04213 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P04213 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P04213 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P04213 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P04213 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P04213 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P04213 Gm9244-201ENSMUST00000056767 2129 ntBASIC10.84□□□□□ -0.67
P04213 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC10.84□□□□□ -0.67
P04213 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P04213 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P04213 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.67
P04213 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC10.83□□□□□ -0.67
P04213 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
P04213 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
P04213 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
P04213 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
P04213 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
P04213 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
P04213 AC166836.1-201ENSMUST00000219933 1795 ntBASIC10.83□□□□□ -0.68
P04213 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
P04213 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
P04213 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
P04213 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
P04213 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
P04213 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
P04213 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
P04213 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
P04213 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
P04213 Gm12419-201ENSMUST00000116649 636 ntBASIC10.83□□□□□ -0.68
P04213 Gm11244-201ENSMUST00000121243 237 ntBASIC10.83□□□□□ -0.68
P04213 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC10.83□□□□□ -0.68
P04213 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC10.83□□□□□ -0.68
P04213 Mrip-ps-201ENSMUST00000184613 940 ntBASIC10.83□□□□□ -0.68
P04213 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC10.83□□□□□ -0.68
P04213 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
P04213 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
P04213 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC10.83□□□□□ -0.68
P04213 CT573047.1-201ENSMUST00000223652 851 ntBASIC10.83□□□□□ -0.68
P04213 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
P04213 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
P04213 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
P04213 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
P04213 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
P04213 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
P04213 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
P04213 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC10.83□□□□□ -0.68
P04213 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
P04213 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms