Protein–RNA interactions for Protein: O35874

Slc1a4, Neutral amino acid transporter A, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a4O35874 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Slc1a4O35874 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc1a4O35874 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Slc1a4O35874 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC13.32□□□□□ -0.28
Slc1a4O35874 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc1a4O35874 Gm25766-201ENSMUST00000104101 131 ntBASIC13.32□□□□□ -0.28
Slc1a4O35874 Gm24398-201ENSMUST00000157870 109 ntBASIC13.32□□□□□ -0.28
Slc1a4O35874 Gm21778-201ENSMUST00000178779 471 ntBASIC13.32□□□□□ -0.28
Slc1a4O35874 Gm28388-201ENSMUST00000186262 437 ntBASIC13.32□□□□□ -0.28
Slc1a4O35874 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Slc1a4O35874 CT025602.2-201ENSMUST00000226553 772 ntBASIC13.32□□□□□ -0.28
Slc1a4O35874 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc1a4O35874 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc1a4O35874 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc1a4O35874 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Slc1a4O35874 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Slc1a4O35874 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc1a4O35874 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC13.32□□□□□ -0.28
Slc1a4O35874 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc1a4O35874 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc1a4O35874 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc1a4O35874 Gm6211-201ENSMUST00000147973 4275 ntBASIC13.32□□□□□ -0.28
Slc1a4O35874 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Slc1a4O35874 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC13.32□□□□□ -0.28
Slc1a4O35874 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Slc1a4O35874 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Slc1a4O35874 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Slc1a4O35874 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Slc1a4O35874 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Slc1a4O35874 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Slc1a4O35874 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slc1a4O35874 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Slc1a4O35874 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Slc1a4O35874 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Slc1a4O35874 Gm12899-201ENSMUST00000120565 551 ntBASIC13.31□□□□□ -0.28
Slc1a4O35874 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC13.31□□□□□ -0.28
Slc1a4O35874 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Slc1a4O35874 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Slc1a4O35874 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Slc1a4O35874 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Slc1a4O35874 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Slc1a4O35874 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Slc1a4O35874 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slc1a4O35874 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slc1a4O35874 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Slc1a4O35874 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slc1a4O35874 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slc1a4O35874 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slc1a4O35874 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slc1a4O35874 Gm9544-201ENSMUST00000223349 2482 ntBASIC13.31□□□□□ -0.28
Slc1a4O35874 Gm38055-201ENSMUST00000195353 2217 ntBASIC13.31□□□□□ -0.28
Slc1a4O35874 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC13.3□□□□□ -0.28
Slc1a4O35874 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Slc1a4O35874 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slc1a4O35874 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slc1a4O35874 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Slc1a4O35874 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Slc1a4O35874 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slc1a4O35874 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slc1a4O35874 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Slc1a4O35874 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slc1a4O35874 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slc1a4O35874 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slc1a4O35874 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slc1a4O35874 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slc1a4O35874 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slc1a4O35874 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Slc1a4O35874 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Slc1a4O35874 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Slc1a4O35874 Gm15528-201ENSMUST00000117821 864 ntBASIC13.3□□□□□ -0.28
Slc1a4O35874 Gm14740-201ENSMUST00000118538 1150 ntBASIC13.3□□□□□ -0.28
Slc1a4O35874 Gm15617-201ENSMUST00000118973 771 ntBASIC13.3□□□□□ -0.28
Slc1a4O35874 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Slc1a4O35874 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slc1a4O35874 Gm9358-201ENSMUST00000183067 927 ntBASIC13.3□□□□□ -0.28
Slc1a4O35874 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC13.3□□□□□ -0.28
Slc1a4O35874 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC13.3□□□□□ -0.28
Slc1a4O35874 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC13.3□□□□□ -0.28
Slc1a4O35874 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC13.3□□□□□ -0.28
Slc1a4O35874 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Slc1a4O35874 CT010506.1-201ENSMUST00000223673 349 ntBASIC13.3□□□□□ -0.28
Slc1a4O35874 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slc1a4O35874 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Slc1a4O35874 Gm10254-201ENSMUST00000052888 867 ntBASIC13.3□□□□□ -0.28
Slc1a4O35874 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Slc1a4O35874 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Slc1a4O35874 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Slc1a4O35874 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC13.3□□□□□ -0.28
Slc1a4O35874 AC154537.1-201ENSMUST00000226101 1304 ntBASIC13.3□□□□□ -0.28
Slc1a4O35874 Gm43102-201ENSMUST00000201004 2324 ntBASIC13.3□□□□□ -0.28
Slc1a4O35874 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slc1a4O35874 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slc1a4O35874 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slc1a4O35874 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Slc1a4O35874 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slc1a4O35874 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC13.3□□□□□ -0.28
Slc1a4O35874 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slc1a4O35874 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc1a4O35874 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC13.29□□□□□ -0.28
Slc1a4O35874 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 100.8 ms