Protein–RNA interactions for Protein: E9PX29

Sptbn4, Spectrin beta chain, mousemouse

Predictions only

Length 2,561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4E9PX29 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sptbn4E9PX29 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC10.15□□□□□ -0.78
Sptbn4E9PX29 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sptbn4E9PX29 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sptbn4E9PX29 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sptbn4E9PX29 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sptbn4E9PX29 Nmrk2-201ENSMUST00000005069 1854 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sptbn4E9PX29 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sptbn4E9PX29 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sptbn4E9PX29 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sptbn4E9PX29 Rab29-202ENSMUST00000112386 1202 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sptbn4E9PX29 Gm20467-201ENSMUST00000172872 994 ntTSL 3 BASIC10.15□□□□□ -0.78
Sptbn4E9PX29 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC10.15□□□□□ -0.78
Sptbn4E9PX29 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Sptbn4E9PX29 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sptbn4E9PX29 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Sptbn4E9PX29 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sptbn4E9PX29 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Sptbn4E9PX29 9530059O14Rik-204ENSMUST00000215759 1606 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Sptbn4E9PX29 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Sptbn4E9PX29 Gm5822-201ENSMUST00000161562 1378 ntBASIC10.15□□□□□ -0.79
Sptbn4E9PX29 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.79
Sptbn4E9PX29 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC10.15□□□□□ -0.79
Sptbn4E9PX29 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Sptbn4E9PX29 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.79
Sptbn4E9PX29 8430423G03Rik-201ENSMUST00000110507 639 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Sptbn4E9PX29 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Sptbn4E9PX29 Gm20281-201ENSMUST00000188225 267 ntBASIC10.15□□□□□ -0.79
Sptbn4E9PX29 Gm4866-201ENSMUST00000197408 589 ntBASIC10.15□□□□□ -0.79
Sptbn4E9PX29 Gm42952-204ENSMUST00000198572 408 ntTSL 3 BASIC10.15□□□□□ -0.79
Sptbn4E9PX29 Gm34397-201ENSMUST00000213192 708 ntTSL 3 BASIC10.15□□□□□ -0.79
Sptbn4E9PX29 AC155293.1-201ENSMUST00000219793 1026 ntBASIC10.15□□□□□ -0.79
Sptbn4E9PX29 AC127583.1-201ENSMUST00000224351 540 ntBASIC10.15□□□□□ -0.79
Sptbn4E9PX29 AC102327.1-201ENSMUST00000226389 742 ntBASIC10.15□□□□□ -0.79
Sptbn4E9PX29 CT025618.1-203ENSMUST00000227008 589 ntBASIC10.15□□□□□ -0.79
Sptbn4E9PX29 Scgb3a1-201ENSMUST00000043873 493 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.79
Sptbn4E9PX29 H2al1m-201ENSMUST00000073949 535 ntAPPRIS P1 BASIC10.15□□□□□ -0.79
Sptbn4E9PX29 Scgb3a1-202ENSMUST00000076006 598 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Sptbn4E9PX29 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Sptbn4E9PX29 Gm7061-201ENSMUST00000118127 1416 ntBASIC10.15□□□□□ -0.79
Sptbn4E9PX29 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Sptbn4E9PX29 Gm9924-202ENSMUST00000192760 2311 ntBASIC10.14□□□□□ -0.79
Sptbn4E9PX29 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Sptbn4E9PX29 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Sptbn4E9PX29 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Sptbn4E9PX29 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Sptbn4E9PX29 Ntf3-203ENSMUST00000204542 1343 ntAPPRIS ALT1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Sptbn4E9PX29 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC10.14□□□□□ -0.79
Sptbn4E9PX29 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Sptbn4E9PX29 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Sptbn4E9PX29 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC10.14□□□□□ -0.79
Sptbn4E9PX29 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC10.14□□□□□ -0.79
Sptbn4E9PX29 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Sptbn4E9PX29 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Sptbn4E9PX29 Gm27196-201ENSMUST00000184787 2582 ntBASIC10.14□□□□□ -0.79
Sptbn4E9PX29 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Sptbn4E9PX29 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Sptbn4E9PX29 Gm16214-201ENSMUST00000143710 1388 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Sptbn4E9PX29 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Sptbn4E9PX29 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Sptbn4E9PX29 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Sptbn4E9PX29 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Sptbn4E9PX29 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Sptbn4E9PX29 Scgb1b29-201ENSMUST00000108094 282 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Sptbn4E9PX29 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Sptbn4E9PX29 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC10.14□□□□□ -0.79
Sptbn4E9PX29 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Sptbn4E9PX29 AI506816-201ENSMUST00000197153 474 ntTSL 5 BASIC10.14□□□□□ -0.79
Sptbn4E9PX29 Tex47-201ENSMUST00000088796 1085 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Sptbn4E9PX29 Gm42971-201ENSMUST00000199228 2079 ntBASIC10.14□□□□□ -0.79
Sptbn4E9PX29 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Sptbn4E9PX29 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC10.14□□□□□ -0.79
Sptbn4E9PX29 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Sptbn4E9PX29 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Sptbn4E9PX29 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Sptbn4E9PX29 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Sptbn4E9PX29 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Sptbn4E9PX29 Slc10a1-201ENSMUST00000095572 1674 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Sptbn4E9PX29 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Sptbn4E9PX29 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Sptbn4E9PX29 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Sptbn4E9PX29 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Sptbn4E9PX29 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Sptbn4E9PX29 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Sptbn4E9PX29 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Sptbn4E9PX29 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC10.14□□□□□ -0.79
Sptbn4E9PX29 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Sptbn4E9PX29 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Sptbn4E9PX29 Trappc1-202ENSMUST00000102601 759 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Sptbn4E9PX29 Rgs8-205ENSMUST00000111815 765 ntTSL 5 BASIC10.14□□□□□ -0.79
Sptbn4E9PX29 Clec4n-202ENSMUST00000112554 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Sptbn4E9PX29 Gm16288-201ENSMUST00000137940 367 ntBASIC10.14□□□□□ -0.79
Sptbn4E9PX29 Gal3st2b-201ENSMUST00000177958 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Sptbn4E9PX29 Gm18299-201ENSMUST00000192026 636 ntBASIC10.14□□□□□ -0.79
Sptbn4E9PX29 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC10.14□□□□□ -0.79
Sptbn4E9PX29 Rp1-202ENSMUST00000194992 858 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Sptbn4E9PX29 Clec4n-206ENSMUST00000205129 363 ntTSL 5 BASIC10.14□□□□□ -0.79
Sptbn4E9PX29 AC163646.3-202ENSMUST00000228685 691 ntBASIC10.14□□□□□ -0.79
Sptbn4E9PX29 4933427E13Rik-201ENSMUST00000044347 381 ntTSL 5 BASIC10.14□□□□□ -0.79
Sptbn4E9PX29 Gm11437-201ENSMUST00000050771 1239 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms