Protein–RNA interactions for Protein: B9EKI3

Tmf1, TATA element modulatory factor, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmf1B9EKI3 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Tmf1B9EKI3 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Tmf1B9EKI3 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC15.33■□□□□ 0.05
Tmf1B9EKI3 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Tmf1B9EKI3 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
Tmf1B9EKI3 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Tmf1B9EKI3 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Tmf1B9EKI3 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Tmf1B9EKI3 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Tmf1B9EKI3 Gm17230-201ENSMUST00000171194 3942 ntBASIC15.33■□□□□ 0.05
Tmf1B9EKI3 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.05
Tmf1B9EKI3 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Tmf1B9EKI3 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tmf1B9EKI3 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tmf1B9EKI3 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tmf1B9EKI3 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
Tmf1B9EKI3 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC15.33■□□□□ 0.04
Tmf1B9EKI3 Gm14398-201ENSMUST00000117287 1073 ntBASIC15.33■□□□□ 0.04
Tmf1B9EKI3 Gm9133-201ENSMUST00000118289 540 ntBASIC15.33■□□□□ 0.04
Tmf1B9EKI3 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Tmf1B9EKI3 Gm42816-201ENSMUST00000198433 325 ntBASIC15.33■□□□□ 0.04
Tmf1B9EKI3 Gm43380-201ENSMUST00000200421 220 ntBASIC15.33■□□□□ 0.04
Tmf1B9EKI3 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC15.33■□□□□ 0.04
Tmf1B9EKI3 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC15.33■□□□□ 0.04
Tmf1B9EKI3 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tmf1B9EKI3 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Tmf1B9EKI3 Rgr-203ENSMUST00000225070 4704 ntBASIC15.33■□□□□ 0.04
Tmf1B9EKI3 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Tmf1B9EKI3 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tmf1B9EKI3 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tmf1B9EKI3 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tmf1B9EKI3 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tmf1B9EKI3 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tmf1B9EKI3 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Tmf1B9EKI3 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tmf1B9EKI3 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tmf1B9EKI3 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tmf1B9EKI3 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Tmf1B9EKI3 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Tmf1B9EKI3 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Tmf1B9EKI3 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tmf1B9EKI3 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tmf1B9EKI3 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Tmf1B9EKI3 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tmf1B9EKI3 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tmf1B9EKI3 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Tmf1B9EKI3 Gm13326-201ENSMUST00000118730 1011 ntBASIC15.32■□□□□ 0.04
Tmf1B9EKI3 Gm13284-201ENSMUST00000121020 547 ntBASIC15.32■□□□□ 0.04
Tmf1B9EKI3 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC15.32■□□□□ 0.04
Tmf1B9EKI3 Gm4879-201ENSMUST00000122190 1272 ntBASIC15.32■□□□□ 0.04
Tmf1B9EKI3 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC15.32■□□□□ 0.04
Tmf1B9EKI3 Gm15744-201ENSMUST00000161734 213 ntBASIC15.32■□□□□ 0.04
Tmf1B9EKI3 Mir6407-201ENSMUST00000184510 101 ntBASIC15.32■□□□□ 0.04
Tmf1B9EKI3 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC15.32■□□□□ 0.04
Tmf1B9EKI3 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC15.32■□□□□ 0.04
Tmf1B9EKI3 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC15.32■□□□□ 0.04
Tmf1B9EKI3 Gm39288-201ENSMUST00000210554 446 ntBASIC15.32■□□□□ 0.04
Tmf1B9EKI3 AC165154.1-201ENSMUST00000226661 340 ntBASIC15.32■□□□□ 0.04
Tmf1B9EKI3 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tmf1B9EKI3 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Tmf1B9EKI3 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tmf1B9EKI3 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Tmf1B9EKI3 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tmf1B9EKI3 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Tmf1B9EKI3 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Tmf1B9EKI3 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tmf1B9EKI3 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tmf1B9EKI3 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tmf1B9EKI3 AC130823.1-201ENSMUST00000228929 1549 ntBASIC15.32■□□□□ 0.04
Tmf1B9EKI3 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Tmf1B9EKI3 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tmf1B9EKI3 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Tmf1B9EKI3 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tmf1B9EKI3 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tmf1B9EKI3 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tmf1B9EKI3 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Tmf1B9EKI3 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tmf1B9EKI3 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tmf1B9EKI3 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tmf1B9EKI3 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tmf1B9EKI3 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tmf1B9EKI3 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tmf1B9EKI3 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tmf1B9EKI3 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
Tmf1B9EKI3 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tmf1B9EKI3 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC15.31■□□□□ 0.04
Tmf1B9EKI3 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tmf1B9EKI3 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC15.31■□□□□ 0.04
Tmf1B9EKI3 Gm12194-201ENSMUST00000117756 1012 ntBASIC15.31■□□□□ 0.04
Tmf1B9EKI3 Gm15197-201ENSMUST00000120526 478 ntBASIC15.31■□□□□ 0.04
Tmf1B9EKI3 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tmf1B9EKI3 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC15.31■□□□□ 0.04
Tmf1B9EKI3 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC15.31■□□□□ 0.04
Tmf1B9EKI3 Gm4895-201ENSMUST00000181646 1137 ntBASIC15.31■□□□□ 0.04
Tmf1B9EKI3 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC15.31■□□□□ 0.04
Tmf1B9EKI3 AC134248.1-201ENSMUST00000216113 1176 ntBASIC15.31■□□□□ 0.04
Tmf1B9EKI3 AC164618.2-201ENSMUST00000224770 573 ntBASIC15.31■□□□□ 0.04
Tmf1B9EKI3 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Tmf1B9EKI3 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tmf1B9EKI3 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms