Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn3aA2ASI5 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn3aA2ASI5 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Scn3aA2ASI5 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn3aA2ASI5 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC12.53□□□□□ -0.4
Scn3aA2ASI5 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC12.53□□□□□ -0.4
Scn3aA2ASI5 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn3aA2ASI5 Gm6831-202ENSMUST00000213025 1673 ntBASIC12.53□□□□□ -0.4
Scn3aA2ASI5 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Scn3aA2ASI5 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn3aA2ASI5 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.53□□□□□ -0.4
Scn3aA2ASI5 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn3aA2ASI5 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn3aA2ASI5 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn3aA2ASI5 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn3aA2ASI5 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn3aA2ASI5 Gm12453-201ENSMUST00000121981 331 ntBASIC12.53□□□□□ -0.4
Scn3aA2ASI5 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn3aA2ASI5 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC12.53□□□□□ -0.4
Scn3aA2ASI5 Gm40414-201ENSMUST00000197608 481 ntBASIC12.53□□□□□ -0.4
Scn3aA2ASI5 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC12.53□□□□□ -0.4
Scn3aA2ASI5 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC12.53□□□□□ -0.4
Scn3aA2ASI5 AC159196.1-201ENSMUST00000225524 377 ntBASIC12.53□□□□□ -0.4
Scn3aA2ASI5 Gm5449-201ENSMUST00000081132 357 ntBASIC12.53□□□□□ -0.4
Scn3aA2ASI5 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Scn3aA2ASI5 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Scn3aA2ASI5 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn3aA2ASI5 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn3aA2ASI5 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn3aA2ASI5 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC12.53□□□□□ -0.4
Scn3aA2ASI5 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn3aA2ASI5 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn3aA2ASI5 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Scn3aA2ASI5 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn3aA2ASI5 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn3aA2ASI5 Gm19027-201ENSMUST00000187291 1355 ntBASIC12.53□□□□□ -0.4
Scn3aA2ASI5 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn3aA2ASI5 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn3aA2ASI5 AC022682.1-201ENSMUST00000224624 2023 ntBASIC12.53□□□□□ -0.4
Scn3aA2ASI5 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn3aA2ASI5 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn3aA2ASI5 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC12.53□□□□□ -0.4
Scn3aA2ASI5 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Scn3aA2ASI5 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn3aA2ASI5 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Scn3aA2ASI5 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn3aA2ASI5 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn3aA2ASI5 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Scn3aA2ASI5 Gm11996-201ENSMUST00000117538 915 ntBASIC12.52□□□□□ -0.4
Scn3aA2ASI5 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Scn3aA2ASI5 Gm26119-201ENSMUST00000175601 104 ntBASIC12.52□□□□□ -0.4
Scn3aA2ASI5 Gm9507-202ENSMUST00000180157 654 ntBASIC12.52□□□□□ -0.4
Scn3aA2ASI5 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Scn3aA2ASI5 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC12.52□□□□□ -0.4
Scn3aA2ASI5 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC12.52□□□□□ -0.4
Scn3aA2ASI5 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Scn3aA2ASI5 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Scn3aA2ASI5 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Scn3aA2ASI5 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Scn3aA2ASI5 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Scn3aA2ASI5 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Scn3aA2ASI5 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.52□□□□□ -0.4
Scn3aA2ASI5 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Scn3aA2ASI5 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Scn3aA2ASI5 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scn3aA2ASI5 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scn3aA2ASI5 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.52□□□□□ -0.41
Scn3aA2ASI5 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scn3aA2ASI5 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scn3aA2ASI5 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Scn3aA2ASI5 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scn3aA2ASI5 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scn3aA2ASI5 Gm22594-201ENSMUST00000104251 130 ntBASIC12.52□□□□□ -0.41
Scn3aA2ASI5 Gm15036-201ENSMUST00000118880 400 ntBASIC12.52□□□□□ -0.41
Scn3aA2ASI5 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC12.52□□□□□ -0.41
Scn3aA2ASI5 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC12.52□□□□□ -0.41
Scn3aA2ASI5 Gm9574-201ENSMUST00000173127 845 ntBASIC12.52□□□□□ -0.41
Scn3aA2ASI5 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Scn3aA2ASI5 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC12.52□□□□□ -0.41
Scn3aA2ASI5 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC12.52□□□□□ -0.41
Scn3aA2ASI5 Gm8162-201ENSMUST00000213951 665 ntBASIC12.52□□□□□ -0.41
Scn3aA2ASI5 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scn3aA2ASI5 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scn3aA2ASI5 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Scn3aA2ASI5 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scn3aA2ASI5 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scn3aA2ASI5 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scn3aA2ASI5 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Scn3aA2ASI5 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Scn3aA2ASI5 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scn3aA2ASI5 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Scn3aA2ASI5 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scn3aA2ASI5 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scn3aA2ASI5 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scn3aA2ASI5 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scn3aA2ASI5 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scn3aA2ASI5 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.51□□□□□ -0.41
Scn3aA2ASI5 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.51□□□□□ -0.41
Scn3aA2ASI5 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scn3aA2ASI5 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms