Protein–RNA interactions for Protein: Q9Z2D8

Mbd3, Methyl-CpG-binding domain protein 3, mousemouse

Known RBP Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3Q9Z2D8 Gm3961-201ENSMUST00000204425 994 ntBASIC14.39□□□□□ -0.11
Mbd3Q9Z2D8 AC159002.1-201ENSMUST00000226714 924 ntBASIC14.39□□□□□ -0.11
Mbd3Q9Z2D8 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Mbd3Q9Z2D8 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Mbd3Q9Z2D8 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Mbd3Q9Z2D8 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC14.39□□□□□ -0.11
Mbd3Q9Z2D8 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Mbd3Q9Z2D8 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Mbd3Q9Z2D8 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Mbd3Q9Z2D8 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Mbd3Q9Z2D8 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Mbd3Q9Z2D8 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Mbd3Q9Z2D8 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Mbd3Q9Z2D8 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Mbd3Q9Z2D8 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Mbd3Q9Z2D8 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mbd3Q9Z2D8 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mbd3Q9Z2D8 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Mbd3Q9Z2D8 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Mbd3Q9Z2D8 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mbd3Q9Z2D8 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Mbd3Q9Z2D8 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Mbd3Q9Z2D8 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mbd3Q9Z2D8 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Mbd3Q9Z2D8 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Mbd3Q9Z2D8 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mbd3Q9Z2D8 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mbd3Q9Z2D8 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC14.38□□□□□ -0.11
Mbd3Q9Z2D8 Gm12247-201ENSMUST00000117585 670 ntBASIC14.38□□□□□ -0.11
Mbd3Q9Z2D8 Gm12196-201ENSMUST00000120954 262 ntBASIC14.38□□□□□ -0.11
Mbd3Q9Z2D8 Gm24749-201ENSMUST00000157838 343 ntBASIC14.38□□□□□ -0.11
Mbd3Q9Z2D8 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Mbd3Q9Z2D8 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Mbd3Q9Z2D8 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC14.38□□□□□ -0.11
Mbd3Q9Z2D8 Gm8100-201ENSMUST00000182906 988 ntBASIC14.38□□□□□ -0.11
Mbd3Q9Z2D8 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mbd3Q9Z2D8 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Mbd3Q9Z2D8 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Mbd3Q9Z2D8 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mbd3Q9Z2D8 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Mbd3Q9Z2D8 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Mbd3Q9Z2D8 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mbd3Q9Z2D8 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC14.38□□□□□ -0.11
Mbd3Q9Z2D8 Gm13812-201ENSMUST00000118061 1347 ntBASIC14.38□□□□□ -0.11
Mbd3Q9Z2D8 Gm13810-201ENSMUST00000118584 1347 ntBASIC14.38□□□□□ -0.11
Mbd3Q9Z2D8 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mbd3Q9Z2D8 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mbd3Q9Z2D8 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mbd3Q9Z2D8 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Mbd3Q9Z2D8 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Mbd3Q9Z2D8 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC14.37□□□□□ -0.11
Mbd3Q9Z2D8 Gm18222-201ENSMUST00000202416 1387 ntBASIC14.37□□□□□ -0.11
Mbd3Q9Z2D8 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC14.37□□□□□ -0.11
Mbd3Q9Z2D8 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Mbd3Q9Z2D8 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Mbd3Q9Z2D8 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Mbd3Q9Z2D8 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Mbd3Q9Z2D8 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Mbd3Q9Z2D8 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mbd3Q9Z2D8 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mbd3Q9Z2D8 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Mbd3Q9Z2D8 Gm12012-201ENSMUST00000118857 1066 ntBASIC14.37□□□□□ -0.11
Mbd3Q9Z2D8 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Mbd3Q9Z2D8 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC14.37□□□□□ -0.11
Mbd3Q9Z2D8 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mbd3Q9Z2D8 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mbd3Q9Z2D8 H2-Q3-201ENSMUST00000172583 608 ntBASIC14.37□□□□□ -0.11
Mbd3Q9Z2D8 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Mbd3Q9Z2D8 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Mbd3Q9Z2D8 Gm37259-201ENSMUST00000193903 849 ntBASIC14.37□□□□□ -0.11
Mbd3Q9Z2D8 Gm7118-201ENSMUST00000200167 1003 ntBASIC14.37□□□□□ -0.11
Mbd3Q9Z2D8 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Mbd3Q9Z2D8 Gm44974-201ENSMUST00000206387 1279 ntBASIC14.37□□□□□ -0.11
Mbd3Q9Z2D8 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC14.37□□□□□ -0.11
Mbd3Q9Z2D8 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC14.37□□□□□ -0.11
Mbd3Q9Z2D8 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mbd3Q9Z2D8 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mbd3Q9Z2D8 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mbd3Q9Z2D8 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Mbd3Q9Z2D8 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Mbd3Q9Z2D8 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mbd3Q9Z2D8 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mbd3Q9Z2D8 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mbd3Q9Z2D8 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Mbd3Q9Z2D8 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mbd3Q9Z2D8 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mbd3Q9Z2D8 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mbd3Q9Z2D8 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mbd3Q9Z2D8 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mbd3Q9Z2D8 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Mbd3Q9Z2D8 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mbd3Q9Z2D8 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC14.36□□□□□ -0.11
Mbd3Q9Z2D8 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mbd3Q9Z2D8 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC14.36□□□□□ -0.11
Mbd3Q9Z2D8 Gm14740-201ENSMUST00000118538 1150 ntBASIC14.36□□□□□ -0.11
Mbd3Q9Z2D8 Gm15374-201ENSMUST00000119313 844 ntBASIC14.36□□□□□ -0.11
Mbd3Q9Z2D8 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Mbd3Q9Z2D8 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Mbd3Q9Z2D8 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Mbd3Q9Z2D8 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms