Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim54Q9ERP3 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim54Q9ERP3 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC12.33□□□□□ -0.44
Trim54Q9ERP3 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC12.33□□□□□ -0.44
Trim54Q9ERP3 Gm17709-201ENSMUST00000174536 1096 ntBASIC12.33□□□□□ -0.44
Trim54Q9ERP3 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC12.33□□□□□ -0.44
Trim54Q9ERP3 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim54Q9ERP3 Gm8197-202ENSMUST00000193422 934 ntBASIC12.33□□□□□ -0.44
Trim54Q9ERP3 Gm9884-201ENSMUST00000194343 1222 ntBASIC12.33□□□□□ -0.44
Trim54Q9ERP3 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim54Q9ERP3 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC12.33□□□□□ -0.44
Trim54Q9ERP3 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC12.33□□□□□ -0.44
Trim54Q9ERP3 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC12.33□□□□□ -0.44
Trim54Q9ERP3 Gm35713-201ENSMUST00000210516 199 ntBASIC12.33□□□□□ -0.44
Trim54Q9ERP3 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC12.33□□□□□ -0.44
Trim54Q9ERP3 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim54Q9ERP3 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim54Q9ERP3 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim54Q9ERP3 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trim54Q9ERP3 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trim54Q9ERP3 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trim54Q9ERP3 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim54Q9ERP3 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim54Q9ERP3 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim54Q9ERP3 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.33□□□□□ -0.44
Trim54Q9ERP3 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim54Q9ERP3 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim54Q9ERP3 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim54Q9ERP3 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim54Q9ERP3 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.33□□□□□ -0.44
Trim54Q9ERP3 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim54Q9ERP3 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim54Q9ERP3 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim54Q9ERP3 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim54Q9ERP3 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim54Q9ERP3 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim54Q9ERP3 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim54Q9ERP3 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim54Q9ERP3 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim54Q9ERP3 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim54Q9ERP3 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.32□□□□□ -0.44
Trim54Q9ERP3 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC12.32□□□□□ -0.44
Trim54Q9ERP3 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim54Q9ERP3 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Trim54Q9ERP3 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim54Q9ERP3 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim54Q9ERP3 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim54Q9ERP3 AC165351.1-201ENSMUST00000219078 2020 ntBASIC12.32□□□□□ -0.44
Trim54Q9ERP3 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim54Q9ERP3 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Trim54Q9ERP3 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim54Q9ERP3 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trim54Q9ERP3 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim54Q9ERP3 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim54Q9ERP3 Gm25148-201ENSMUST00000104611 123 ntBASIC12.32□□□□□ -0.44
Trim54Q9ERP3 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim54Q9ERP3 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Trim54Q9ERP3 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim54Q9ERP3 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim54Q9ERP3 Gm21778-201ENSMUST00000178779 471 ntBASIC12.32□□□□□ -0.44
Trim54Q9ERP3 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim54Q9ERP3 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC12.32□□□□□ -0.44
Trim54Q9ERP3 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC12.32□□□□□ -0.44
Trim54Q9ERP3 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC12.32□□□□□ -0.44
Trim54Q9ERP3 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC12.32□□□□□ -0.44
Trim54Q9ERP3 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC12.32□□□□□ -0.44
Trim54Q9ERP3 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Trim54Q9ERP3 Gm35960-201ENSMUST00000202712 767 ntBASIC12.32□□□□□ -0.44
Trim54Q9ERP3 Mt1-202ENSMUST00000211807 1085 ntBASIC12.32□□□□□ -0.44
Trim54Q9ERP3 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC12.32□□□□□ -0.44
Trim54Q9ERP3 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim54Q9ERP3 Mir483-201ENSMUST00000093631 73 ntBASIC12.32□□□□□ -0.44
Trim54Q9ERP3 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim54Q9ERP3 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim54Q9ERP3 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim54Q9ERP3 Gm21759-201ENSMUST00000178345 1828 ntBASIC12.32□□□□□ -0.44
Trim54Q9ERP3 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trim54Q9ERP3 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim54Q9ERP3 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim54Q9ERP3 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim54Q9ERP3 Gm26684-202ENSMUST00000228229 8257 ntBASIC12.32□□□□□ -0.44
Trim54Q9ERP3 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trim54Q9ERP3 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim54Q9ERP3 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim54Q9ERP3 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC12.31□□□□□ -0.44
Trim54Q9ERP3 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Trim54Q9ERP3 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC12.31□□□□□ -0.44
Trim54Q9ERP3 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim54Q9ERP3 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.31□□□□□ -0.44
Trim54Q9ERP3 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim54Q9ERP3 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trim54Q9ERP3 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim54Q9ERP3 Gm15528-201ENSMUST00000117821 864 ntBASIC12.31□□□□□ -0.44
Trim54Q9ERP3 Gm12969-201ENSMUST00000120199 1004 ntBASIC12.31□□□□□ -0.44
Trim54Q9ERP3 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim54Q9ERP3 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trim54Q9ERP3 Gm8723-201ENSMUST00000166076 820 ntBASIC12.31□□□□□ -0.44
Trim54Q9ERP3 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim54Q9ERP3 Gm8701-201ENSMUST00000169259 874 ntBASIC12.31□□□□□ -0.44
Trim54Q9ERP3 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms