Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cfap53Q9D439 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cfap53Q9D439 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Cfap53Q9D439 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cfap53Q9D439 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cfap53Q9D439 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cfap53Q9D439 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cfap53Q9D439 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cfap53Q9D439 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Cfap53Q9D439 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cfap53Q9D439 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cfap53Q9D439 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cfap53Q9D439 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cfap53Q9D439 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cfap53Q9D439 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cfap53Q9D439 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cfap53Q9D439 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cfap53Q9D439 Gm38055-201ENSMUST00000195353 2217 ntBASIC12.48□□□□□ -0.41
Cfap53Q9D439 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cfap53Q9D439 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cfap53Q9D439 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Cfap53Q9D439 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC12.48□□□□□ -0.41
Cfap53Q9D439 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC12.48□□□□□ -0.41
Cfap53Q9D439 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC12.48□□□□□ -0.41
Cfap53Q9D439 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cfap53Q9D439 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cfap53Q9D439 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC12.48□□□□□ -0.41
Cfap53Q9D439 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cfap53Q9D439 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC12.48□□□□□ -0.41
Cfap53Q9D439 Gm6722-201ENSMUST00000221586 390 ntBASIC12.48□□□□□ -0.41
Cfap53Q9D439 AC118639.2-201ENSMUST00000226289 223 ntBASIC12.48□□□□□ -0.41
Cfap53Q9D439 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cfap53Q9D439 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cfap53Q9D439 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cfap53Q9D439 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cfap53Q9D439 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Cfap53Q9D439 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cfap53Q9D439 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Cfap53Q9D439 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cfap53Q9D439 Gm5740-201ENSMUST00000211003 1857 ntBASIC12.48□□□□□ -0.41
Cfap53Q9D439 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cfap53Q9D439 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Cfap53Q9D439 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cfap53Q9D439 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cfap53Q9D439 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cfap53Q9D439 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cfap53Q9D439 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cfap53Q9D439 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Cfap53Q9D439 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cfap53Q9D439 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cfap53Q9D439 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cfap53Q9D439 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cfap53Q9D439 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cfap53Q9D439 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Cfap53Q9D439 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Cfap53Q9D439 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cfap53Q9D439 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cfap53Q9D439 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Cfap53Q9D439 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cfap53Q9D439 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cfap53Q9D439 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC12.47□□□□□ -0.41
Cfap53Q9D439 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cfap53Q9D439 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Cfap53Q9D439 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC12.47□□□□□ -0.41
Cfap53Q9D439 Gm6506-201ENSMUST00000119775 1136 ntBASIC12.47□□□□□ -0.41
Cfap53Q9D439 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cfap53Q9D439 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cfap53Q9D439 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cfap53Q9D439 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cfap53Q9D439 Gm6397-201ENSMUST00000161973 1069 ntBASIC12.47□□□□□ -0.41
Cfap53Q9D439 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC12.47□□□□□ -0.41
Cfap53Q9D439 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC12.47□□□□□ -0.41
Cfap53Q9D439 Gm44506-201ENSMUST00000206278 965 ntBASIC12.47□□□□□ -0.41
Cfap53Q9D439 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cfap53Q9D439 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cfap53Q9D439 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cfap53Q9D439 Gm7551-201ENSMUST00000089593 1074 ntBASIC12.47□□□□□ -0.41
Cfap53Q9D439 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cfap53Q9D439 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cfap53Q9D439 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cfap53Q9D439 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cfap53Q9D439 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Cfap53Q9D439 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Cfap53Q9D439 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cfap53Q9D439 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cfap53Q9D439 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cfap53Q9D439 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cfap53Q9D439 Gm37969-201ENSMUST00000195777 3409 ntBASIC12.47□□□□□ -0.41
Cfap53Q9D439 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cfap53Q9D439 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Cfap53Q9D439 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cfap53Q9D439 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cfap53Q9D439 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cfap53Q9D439 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Cfap53Q9D439 Gm43860-201ENSMUST00000201742 2705 ntBASIC12.46□□□□□ -0.41
Cfap53Q9D439 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cfap53Q9D439 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cfap53Q9D439 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cfap53Q9D439 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cfap53Q9D439 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 102.7 ms