Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ddx56Q9D0R4 Gm11244-201ENSMUST00000121243 237 ntBASIC11.96□□□□□ -0.49
Ddx56Q9D0R4 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
Ddx56Q9D0R4 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC11.96□□□□□ -0.49
Ddx56Q9D0R4 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ddx56Q9D0R4 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ddx56Q9D0R4 Gm22846-201ENSMUST00000157706 270 ntBASIC11.96□□□□□ -0.49
Ddx56Q9D0R4 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ddx56Q9D0R4 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Ddx56Q9D0R4 Gm18367-201ENSMUST00000176139 600 ntBASIC11.96□□□□□ -0.49
Ddx56Q9D0R4 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ddx56Q9D0R4 Gm38114-201ENSMUST00000191877 1232 ntBASIC11.96□□□□□ -0.49
Ddx56Q9D0R4 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Ddx56Q9D0R4 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC11.96□□□□□ -0.49
Ddx56Q9D0R4 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC11.96□□□□□ -0.49
Ddx56Q9D0R4 AC166344.1-201ENSMUST00000223745 674 ntBASIC11.96□□□□□ -0.49
Ddx56Q9D0R4 AC154290.1-201ENSMUST00000223786 1240 ntBASIC11.96□□□□□ -0.49
Ddx56Q9D0R4 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ddx56Q9D0R4 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ddx56Q9D0R4 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ddx56Q9D0R4 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ddx56Q9D0R4 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ddx56Q9D0R4 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ddx56Q9D0R4 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC11.96□□□□□ -0.5
Ddx56Q9D0R4 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ddx56Q9D0R4 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ddx56Q9D0R4 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ddx56Q9D0R4 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ddx56Q9D0R4 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Ddx56Q9D0R4 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.95□□□□□ -0.5
Ddx56Q9D0R4 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ddx56Q9D0R4 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ddx56Q9D0R4 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ddx56Q9D0R4 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ddx56Q9D0R4 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.95□□□□□ -0.5
Ddx56Q9D0R4 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Ddx56Q9D0R4 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC11.95□□□□□ -0.5
Ddx56Q9D0R4 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ddx56Q9D0R4 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC11.95□□□□□ -0.5
Ddx56Q9D0R4 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ddx56Q9D0R4 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ddx56Q9D0R4 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
Ddx56Q9D0R4 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
Ddx56Q9D0R4 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Ddx56Q9D0R4 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ddx56Q9D0R4 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ddx56Q9D0R4 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ddx56Q9D0R4 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ddx56Q9D0R4 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ddx56Q9D0R4 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ddx56Q9D0R4 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ddx56Q9D0R4 AC153380.1-201ENSMUST00000214959 2364 ntBASIC11.95□□□□□ -0.5
Ddx56Q9D0R4 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ddx56Q9D0R4 Gm4294-201ENSMUST00000105169 614 ntBASIC11.95□□□□□ -0.5
Ddx56Q9D0R4 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC11.95□□□□□ -0.5
Ddx56Q9D0R4 Gm13045-201ENSMUST00000119019 712 ntBASIC11.95□□□□□ -0.5
Ddx56Q9D0R4 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC11.95□□□□□ -0.5
Ddx56Q9D0R4 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ddx56Q9D0R4 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ddx56Q9D0R4 Gm19353-201ENSMUST00000184561 445 ntBASIC11.95□□□□□ -0.5
Ddx56Q9D0R4 AC102569.1-201ENSMUST00000221563 685 ntBASIC11.95□□□□□ -0.5
Ddx56Q9D0R4 CT009546.1-201ENSMUST00000222573 1120 ntBASIC11.95□□□□□ -0.5
Ddx56Q9D0R4 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ddx56Q9D0R4 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Ddx56Q9D0R4 Olfr584-201ENSMUST00000098210 964 ntBASIC11.95□□□□□ -0.5
Ddx56Q9D0R4 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ddx56Q9D0R4 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ddx56Q9D0R4 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ddx56Q9D0R4 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ddx56Q9D0R4 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC11.95□□□□□ -0.5
Ddx56Q9D0R4 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ddx56Q9D0R4 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ddx56Q9D0R4 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ddx56Q9D0R4 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ddx56Q9D0R4 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Ddx56Q9D0R4 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ddx56Q9D0R4 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ddx56Q9D0R4 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ddx56Q9D0R4 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ddx56Q9D0R4 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Ddx56Q9D0R4 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ddx56Q9D0R4 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ddx56Q9D0R4 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Ddx56Q9D0R4 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ddx56Q9D0R4 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ddx56Q9D0R4 AC153506.1-201ENSMUST00000218768 2915 ntBASIC11.94□□□□□ -0.5
Ddx56Q9D0R4 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ddx56Q9D0R4 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ddx56Q9D0R4 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ddx56Q9D0R4 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ddx56Q9D0R4 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ddx56Q9D0R4 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ddx56Q9D0R4 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ddx56Q9D0R4 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ddx56Q9D0R4 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC11.94□□□□□ -0.5
Ddx56Q9D0R4 Gm25148-201ENSMUST00000104611 123 ntBASIC11.94□□□□□ -0.5
Ddx56Q9D0R4 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Ddx56Q9D0R4 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ddx56Q9D0R4 Gm15352-201ENSMUST00000118696 270 ntBASIC11.94□□□□□ -0.5
Ddx56Q9D0R4 Gm15374-201ENSMUST00000119313 844 ntBASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms