Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC12.02□□□□□ -0.49
Rpa3Q9CQ71 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rpa3Q9CQ71 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC12.01□□□□□ -0.49
Rpa3Q9CQ71 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rpa3Q9CQ71 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rpa3Q9CQ71 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rpa3Q9CQ71 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Rpa3Q9CQ71 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rpa3Q9CQ71 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Rpa3Q9CQ71 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rpa3Q9CQ71 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rpa3Q9CQ71 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rpa3Q9CQ71 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rpa3Q9CQ71 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rpa3Q9CQ71 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Rpa3Q9CQ71 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC12.01□□□□□ -0.49
Rpa3Q9CQ71 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rpa3Q9CQ71 Gm45416-201ENSMUST00000209713 2201 ntBASIC12.01□□□□□ -0.49
Rpa3Q9CQ71 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rpa3Q9CQ71 Gm43127-201ENSMUST00000195890 2789 ntBASIC12.01□□□□□ -0.49
Rpa3Q9CQ71 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Rpa3Q9CQ71 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Rpa3Q9CQ71 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rpa3Q9CQ71 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rpa3Q9CQ71 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rpa3Q9CQ71 Gm13611-201ENSMUST00000118269 318 ntBASIC12.01□□□□□ -0.49
Rpa3Q9CQ71 Gm11836-201ENSMUST00000121022 441 ntBASIC12.01□□□□□ -0.49
Rpa3Q9CQ71 Gm15329-201ENSMUST00000121408 155 ntBASIC12.01□□□□□ -0.49
Rpa3Q9CQ71 Gm8737-201ENSMUST00000122208 642 ntBASIC12.01□□□□□ -0.49
Rpa3Q9CQ71 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC12.01□□□□□ -0.49
Rpa3Q9CQ71 Gm4726-201ENSMUST00000135604 736 ntBASIC12.01□□□□□ -0.49
Rpa3Q9CQ71 Gm6019-201ENSMUST00000148369 736 ntBASIC12.01□□□□□ -0.49
Rpa3Q9CQ71 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Rpa3Q9CQ71 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rpa3Q9CQ71 Mir5132-201ENSMUST00000175166 71 ntBASIC12.01□□□□□ -0.49
Rpa3Q9CQ71 Gm18367-201ENSMUST00000176139 600 ntBASIC12.01□□□□□ -0.49
Rpa3Q9CQ71 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rpa3Q9CQ71 Ighv5-11-201ENSMUST00000193354 371 ntBASIC12.01□□□□□ -0.49
Rpa3Q9CQ71 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rpa3Q9CQ71 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rpa3Q9CQ71 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rpa3Q9CQ71 Olfr584-201ENSMUST00000098210 964 ntBASIC12.01□□□□□ -0.49
Rpa3Q9CQ71 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rpa3Q9CQ71 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Rpa3Q9CQ71 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rpa3Q9CQ71 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rpa3Q9CQ71 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rpa3Q9CQ71 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rpa3Q9CQ71 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rpa3Q9CQ71 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Rpa3Q9CQ71 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC12.01□□□□□ -0.49
Rpa3Q9CQ71 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Rpa3Q9CQ71 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rpa3Q9CQ71 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rpa3Q9CQ71 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rpa3Q9CQ71 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Rpa3Q9CQ71 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rpa3Q9CQ71 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Rpa3Q9CQ71 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rpa3Q9CQ71 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rpa3Q9CQ71 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Rpa3Q9CQ71 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC12□□□□□ -0.49
Rpa3Q9CQ71 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Rpa3Q9CQ71 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rpa3Q9CQ71 AC167565.1-201ENSMUST00000226980 1833 ntBASIC12□□□□□ -0.49
Rpa3Q9CQ71 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rpa3Q9CQ71 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Rpa3Q9CQ71 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
Rpa3Q9CQ71 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Rpa3Q9CQ71 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rpa3Q9CQ71 Gm13328-201ENSMUST00000120816 1020 ntBASIC12□□□□□ -0.49
Rpa3Q9CQ71 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Rpa3Q9CQ71 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC12□□□□□ -0.49
Rpa3Q9CQ71 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rpa3Q9CQ71 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rpa3Q9CQ71 Gm20426-201ENSMUST00000173657 440 ntBASIC12□□□□□ -0.49
Rpa3Q9CQ71 Gm23045-201ENSMUST00000175041 96 ntBASIC12□□□□□ -0.49
Rpa3Q9CQ71 Gm4654-201ENSMUST00000183305 982 ntBASIC12□□□□□ -0.49
Rpa3Q9CQ71 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Rpa3Q9CQ71 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rpa3Q9CQ71 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC12□□□□□ -0.49
Rpa3Q9CQ71 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Rpa3Q9CQ71 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC12□□□□□ -0.49
Rpa3Q9CQ71 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rpa3Q9CQ71 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC12□□□□□ -0.49
Rpa3Q9CQ71 Gm6781-201ENSMUST00000038304 1242 ntBASIC12□□□□□ -0.49
Rpa3Q9CQ71 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Rpa3Q9CQ71 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Rpa3Q9CQ71 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Rpa3Q9CQ71 Gm28424-201ENSMUST00000187393 1319 ntBASIC12□□□□□ -0.49
Rpa3Q9CQ71 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rpa3Q9CQ71 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC12□□□□□ -0.49
Rpa3Q9CQ71 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rpa3Q9CQ71 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rpa3Q9CQ71 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rpa3Q9CQ71 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Rpa3Q9CQ71 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC12□□□□□ -0.49
Rpa3Q9CQ71 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Rpa3Q9CQ71 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rpa3Q9CQ71 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms