Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC11.48□□□□□ -0.57
Smarcd2Q99JR8 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Smarcd2Q99JR8 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Smarcd2Q99JR8 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smarcd2Q99JR8 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smarcd2Q99JR8 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smarcd2Q99JR8 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Smarcd2Q99JR8 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Smarcd2Q99JR8 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Smarcd2Q99JR8 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Smarcd2Q99JR8 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Smarcd2Q99JR8 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Smarcd2Q99JR8 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smarcd2Q99JR8 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smarcd2Q99JR8 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smarcd2Q99JR8 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smarcd2Q99JR8 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Smarcd2Q99JR8 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Smarcd2Q99JR8 Gm9244-201ENSMUST00000056767 2129 ntBASIC11.48□□□□□ -0.57
Smarcd2Q99JR8 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smarcd2Q99JR8 Gm43760-201ENSMUST00000202120 3015 ntBASIC11.48□□□□□ -0.57
Smarcd2Q99JR8 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.48□□□□□ -0.57
Smarcd2Q99JR8 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Smarcd2Q99JR8 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smarcd2Q99JR8 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smarcd2Q99JR8 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smarcd2Q99JR8 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smarcd2Q99JR8 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
Smarcd2Q99JR8 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Smarcd2Q99JR8 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smarcd2Q99JR8 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Smarcd2Q99JR8 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smarcd2Q99JR8 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Smarcd2Q99JR8 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smarcd2Q99JR8 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Smarcd2Q99JR8 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Smarcd2Q99JR8 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.47□□□□□ -0.57
Smarcd2Q99JR8 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smarcd2Q99JR8 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.47□□□□□ -0.57
Smarcd2Q99JR8 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Smarcd2Q99JR8 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
Smarcd2Q99JR8 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
Smarcd2Q99JR8 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smarcd2Q99JR8 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smarcd2Q99JR8 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smarcd2Q99JR8 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Smarcd2Q99JR8 Gm3836-201ENSMUST00000211377 1613 ntBASIC11.47□□□□□ -0.57
Smarcd2Q99JR8 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Smarcd2Q99JR8 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smarcd2Q99JR8 Gm42499-201ENSMUST00000196193 1412 ntBASIC11.47□□□□□ -0.57
Smarcd2Q99JR8 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC11.47□□□□□ -0.57
Smarcd2Q99JR8 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC11.47□□□□□ -0.57
Smarcd2Q99JR8 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC11.47□□□□□ -0.57
Smarcd2Q99JR8 Gm22594-201ENSMUST00000104251 130 ntBASIC11.47□□□□□ -0.57
Smarcd2Q99JR8 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Smarcd2Q99JR8 Gm3828-201ENSMUST00000121817 257 ntBASIC11.47□□□□□ -0.57
Smarcd2Q99JR8 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Smarcd2Q99JR8 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smarcd2Q99JR8 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Smarcd2Q99JR8 Gm9162-201ENSMUST00000182081 991 ntBASIC11.47□□□□□ -0.57
Smarcd2Q99JR8 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smarcd2Q99JR8 Gm43969-201ENSMUST00000204833 535 ntBASIC11.47□□□□□ -0.57
Smarcd2Q99JR8 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC11.47□□□□□ -0.57
Smarcd2Q99JR8 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC11.47□□□□□ -0.57
Smarcd2Q99JR8 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Smarcd2Q99JR8 Gm5178-201ENSMUST00000219380 898 ntBASIC11.47□□□□□ -0.57
Smarcd2Q99JR8 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC11.47□□□□□ -0.57
Smarcd2Q99JR8 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC11.47□□□□□ -0.57
Smarcd2Q99JR8 Lect2-202ENSMUST00000225183 823 ntBASIC11.47□□□□□ -0.57
Smarcd2Q99JR8 AC159002.1-201ENSMUST00000226714 924 ntBASIC11.47□□□□□ -0.57
Smarcd2Q99JR8 AC142266.1-201ENSMUST00000228107 415 ntBASIC11.47□□□□□ -0.57
Smarcd2Q99JR8 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smarcd2Q99JR8 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smarcd2Q99JR8 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smarcd2Q99JR8 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC11.47□□□□□ -0.57
Smarcd2Q99JR8 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Smarcd2Q99JR8 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Smarcd2Q99JR8 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smarcd2Q99JR8 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.47□□□□□ -0.57
Smarcd2Q99JR8 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smarcd2Q99JR8 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smarcd2Q99JR8 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC11.47□□□□□ -0.57
Smarcd2Q99JR8 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smarcd2Q99JR8 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smarcd2Q99JR8 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smarcd2Q99JR8 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smarcd2Q99JR8 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smarcd2Q99JR8 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smarcd2Q99JR8 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smarcd2Q99JR8 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smarcd2Q99JR8 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smarcd2Q99JR8 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smarcd2Q99JR8 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smarcd2Q99JR8 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Smarcd2Q99JR8 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Smarcd2Q99JR8 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smarcd2Q99JR8 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Smarcd2Q99JR8 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Smarcd2Q99JR8 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Smarcd2Q99JR8 Gm11957-201ENSMUST00000118304 779 ntBASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms