Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Nup35Q8R4R6 Gm6124-201ENSMUST00000188240 2580 ntBASIC9.23□□□□□ -0.93
Nup35Q8R4R6 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nup35Q8R4R6 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nup35Q8R4R6 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Nup35Q8R4R6 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nup35Q8R4R6 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nup35Q8R4R6 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC9.23□□□□□ -0.93
Nup35Q8R4R6 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nup35Q8R4R6 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nup35Q8R4R6 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nup35Q8R4R6 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nup35Q8R4R6 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nup35Q8R4R6 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nup35Q8R4R6 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC9.23□□□□□ -0.93
Nup35Q8R4R6 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC9.23□□□□□ -0.93
Nup35Q8R4R6 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Nup35Q8R4R6 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nup35Q8R4R6 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC9.22□□□□□ -0.93
Nup35Q8R4R6 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Nup35Q8R4R6 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Nup35Q8R4R6 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Nup35Q8R4R6 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Nup35Q8R4R6 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Nup35Q8R4R6 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Nup35Q8R4R6 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Nup35Q8R4R6 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC9.22□□□□□ -0.93
Nup35Q8R4R6 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Nup35Q8R4R6 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Nup35Q8R4R6 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Nup35Q8R4R6 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Nup35Q8R4R6 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Nup35Q8R4R6 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Nup35Q8R4R6 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Nup35Q8R4R6 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Nup35Q8R4R6 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Nup35Q8R4R6 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Nup35Q8R4R6 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Nup35Q8R4R6 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC9.22□□□□□ -0.93
Nup35Q8R4R6 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC9.22□□□□□ -0.93
Nup35Q8R4R6 Gm14109-201ENSMUST00000118814 309 ntBASIC9.22□□□□□ -0.93
Nup35Q8R4R6 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Nup35Q8R4R6 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Nup35Q8R4R6 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC9.22□□□□□ -0.93
Nup35Q8R4R6 Snora78-201ENSMUST00000158630 128 ntBASIC9.22□□□□□ -0.93
Nup35Q8R4R6 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC9.22□□□□□ -0.93
Nup35Q8R4R6 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Nup35Q8R4R6 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Nup35Q8R4R6 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC9.22□□□□□ -0.93
Nup35Q8R4R6 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC9.22□□□□□ -0.93
Nup35Q8R4R6 Rprl1-202ENSMUST00000198476 238 ntBASIC9.22□□□□□ -0.93
Nup35Q8R4R6 Gm4157-201ENSMUST00000211647 679 ntBASIC9.22□□□□□ -0.93
Nup35Q8R4R6 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC9.22□□□□□ -0.93
Nup35Q8R4R6 Gm9797-202ENSMUST00000218003 294 ntBASIC9.22□□□□□ -0.93
Nup35Q8R4R6 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Nup35Q8R4R6 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Nup35Q8R4R6 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Nup35Q8R4R6 Gm37600-201ENSMUST00000193764 3292 ntBASIC9.22□□□□□ -0.93
Nup35Q8R4R6 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Nup35Q8R4R6 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Nup35Q8R4R6 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Nup35Q8R4R6 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
Nup35Q8R4R6 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC9.22□□□□□ -0.93
Nup35Q8R4R6 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Nup35Q8R4R6 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Nup35Q8R4R6 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Nup35Q8R4R6 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Nup35Q8R4R6 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Nup35Q8R4R6 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Nup35Q8R4R6 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Nup35Q8R4R6 Gm19040-201ENSMUST00000203280 4726 ntBASIC9.22□□□□□ -0.93
Nup35Q8R4R6 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Nup35Q8R4R6 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Nup35Q8R4R6 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.93
Nup35Q8R4R6 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Nup35Q8R4R6 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Nup35Q8R4R6 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.93
Nup35Q8R4R6 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.93
Nup35Q8R4R6 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Nup35Q8R4R6 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Nup35Q8R4R6 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC9.21□□□□□ -0.93
Nup35Q8R4R6 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC9.21□□□□□ -0.93
Nup35Q8R4R6 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.93
Nup35Q8R4R6 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Nup35Q8R4R6 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Nup35Q8R4R6 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.93
Nup35Q8R4R6 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC9.21□□□□□ -0.93
Nup35Q8R4R6 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Nup35Q8R4R6 Gm22133-201ENSMUST00000102082 109 ntBASIC9.21□□□□□ -0.94
Nup35Q8R4R6 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC9.21□□□□□ -0.94
Nup35Q8R4R6 Mir1896-201ENSMUST00000122641 81 ntBASIC9.21□□□□□ -0.94
Nup35Q8R4R6 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Nup35Q8R4R6 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC9.21□□□□□ -0.94
Nup35Q8R4R6 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC9.21□□□□□ -0.94
Nup35Q8R4R6 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Nup35Q8R4R6 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC9.21□□□□□ -0.94
Nup35Q8R4R6 Gm27046-201ENSMUST00000182160 463 ntBASIC9.21□□□□□ -0.94
Nup35Q8R4R6 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC9.21□□□□□ -0.94
Nup35Q8R4R6 Gm8343-201ENSMUST00000182705 994 ntBASIC9.21□□□□□ -0.94
Nup35Q8R4R6 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 112.9 ms