Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm37905-201ENSMUST00000195310 341 ntBASIC13.68□□□□□ -0.22
Brf1Q8CFK2 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC13.68□□□□□ -0.22
Brf1Q8CFK2 AC160929.1-201ENSMUST00000221247 415 ntBASIC13.68□□□□□ -0.22
Brf1Q8CFK2 CT030170.2-201ENSMUST00000223267 126 ntBASIC13.68□□□□□ -0.22
Brf1Q8CFK2 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Brf1Q8CFK2 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Brf1Q8CFK2 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Brf1Q8CFK2 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Brf1Q8CFK2 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Brf1Q8CFK2 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Brf1Q8CFK2 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Brf1Q8CFK2 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Brf1Q8CFK2 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Brf1Q8CFK2 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Brf1Q8CFK2 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC13.67□□□□□ -0.22
Brf1Q8CFK2 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC13.67□□□□□ -0.22
Brf1Q8CFK2 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Brf1Q8CFK2 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Brf1Q8CFK2 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Brf1Q8CFK2 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Brf1Q8CFK2 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Brf1Q8CFK2 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Brf1Q8CFK2 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Brf1Q8CFK2 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Brf1Q8CFK2 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Brf1Q8CFK2 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Brf1Q8CFK2 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Brf1Q8CFK2 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Brf1Q8CFK2 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Brf1Q8CFK2 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Brf1Q8CFK2 Snord17-201ENSMUST00000104526 238 ntBASIC13.67□□□□□ -0.22
Brf1Q8CFK2 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Brf1Q8CFK2 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC13.67□□□□□ -0.22
Brf1Q8CFK2 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC13.67□□□□□ -0.22
Brf1Q8CFK2 Gm37458-201ENSMUST00000194055 410 ntBASIC13.67□□□□□ -0.22
Brf1Q8CFK2 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC13.67□□□□□ -0.22
Brf1Q8CFK2 Gm5468-202ENSMUST00000227851 682 ntBASIC13.67□□□□□ -0.22
Brf1Q8CFK2 CT030637.1-201ENSMUST00000228016 669 ntBASIC13.67□□□□□ -0.22
Brf1Q8CFK2 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Brf1Q8CFK2 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Brf1Q8CFK2 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Brf1Q8CFK2 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Brf1Q8CFK2 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Brf1Q8CFK2 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Brf1Q8CFK2 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Brf1Q8CFK2 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC13.67□□□□□ -0.22
Brf1Q8CFK2 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Brf1Q8CFK2 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Brf1Q8CFK2 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Brf1Q8CFK2 Gm9244-201ENSMUST00000056767 2129 ntBASIC13.67□□□□□ -0.22
Brf1Q8CFK2 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Brf1Q8CFK2 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Brf1Q8CFK2 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Brf1Q8CFK2 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Brf1Q8CFK2 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC13.67□□□□□ -0.22
Brf1Q8CFK2 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Brf1Q8CFK2 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Brf1Q8CFK2 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Brf1Q8CFK2 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Brf1Q8CFK2 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Brf1Q8CFK2 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Brf1Q8CFK2 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Brf1Q8CFK2 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC13.66□□□□□ -0.22
Brf1Q8CFK2 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Brf1Q8CFK2 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Brf1Q8CFK2 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Brf1Q8CFK2 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC13.66□□□□□ -0.22
Brf1Q8CFK2 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Brf1Q8CFK2 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Brf1Q8CFK2 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Brf1Q8CFK2 Gm43963-201ENSMUST00000203466 2488 ntBASIC13.66□□□□□ -0.22
Brf1Q8CFK2 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Brf1Q8CFK2 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Brf1Q8CFK2 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Brf1Q8CFK2 Gm15528-201ENSMUST00000117821 864 ntBASIC13.66□□□□□ -0.22
Brf1Q8CFK2 Gm12129-201ENSMUST00000120104 1147 ntBASIC13.66□□□□□ -0.22
Brf1Q8CFK2 Gm14395-201ENSMUST00000120494 563 ntBASIC13.66□□□□□ -0.22
Brf1Q8CFK2 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC13.66□□□□□ -0.22
Brf1Q8CFK2 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC13.66□□□□□ -0.22
Brf1Q8CFK2 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC13.66□□□□□ -0.22
Brf1Q8CFK2 Gm22846-201ENSMUST00000157706 270 ntBASIC13.66□□□□□ -0.22
Brf1Q8CFK2 Mir7051-201ENSMUST00000184167 73 ntBASIC13.66□□□□□ -0.22
Brf1Q8CFK2 Gm37284-201ENSMUST00000193607 539 ntBASIC13.66□□□□□ -0.22
Brf1Q8CFK2 Gm6439-201ENSMUST00000199849 862 ntBASIC13.66□□□□□ -0.22
Brf1Q8CFK2 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC13.66□□□□□ -0.22
Brf1Q8CFK2 Gm8959-201ENSMUST00000213150 571 ntBASIC13.66□□□□□ -0.22
Brf1Q8CFK2 CT485606.1-201ENSMUST00000213187 878 ntBASIC13.66□□□□□ -0.22
Brf1Q8CFK2 AC115122.1-201ENSMUST00000224850 1040 ntBASIC13.66□□□□□ -0.22
Brf1Q8CFK2 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Brf1Q8CFK2 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Brf1Q8CFK2 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Brf1Q8CFK2 Gm10702-201ENSMUST00000098929 1268 ntBASIC13.66□□□□□ -0.22
Brf1Q8CFK2 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Brf1Q8CFK2 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Brf1Q8CFK2 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Brf1Q8CFK2 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Brf1Q8CFK2 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC13.66□□□□□ -0.22
Brf1Q8CFK2 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Brf1Q8CFK2 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Brf1Q8CFK2 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms