Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sh3rf2Q8BZT2 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sh3rf2Q8BZT2 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC11.52□□□□□ -0.57
Sh3rf2Q8BZT2 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sh3rf2Q8BZT2 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sh3rf2Q8BZT2 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sh3rf2Q8BZT2 Gm21759-201ENSMUST00000178345 1828 ntBASIC11.52□□□□□ -0.57
Sh3rf2Q8BZT2 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Sh3rf2Q8BZT2 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sh3rf2Q8BZT2 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sh3rf2Q8BZT2 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Sh3rf2Q8BZT2 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sh3rf2Q8BZT2 Gm9673-201ENSMUST00000119287 781 ntBASIC11.52□□□□□ -0.57
Sh3rf2Q8BZT2 Gm12791-201ENSMUST00000120788 655 ntBASIC11.52□□□□□ -0.57
Sh3rf2Q8BZT2 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sh3rf2Q8BZT2 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sh3rf2Q8BZT2 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sh3rf2Q8BZT2 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sh3rf2Q8BZT2 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sh3rf2Q8BZT2 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC11.52□□□□□ -0.57
Sh3rf2Q8BZT2 AC238811.4-201ENSMUST00000178019 1246 ntBASIC11.52□□□□□ -0.57
Sh3rf2Q8BZT2 AC238940.3-201ENSMUST00000178830 1246 ntBASIC11.52□□□□□ -0.57
Sh3rf2Q8BZT2 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Sh3rf2Q8BZT2 Gm9081-201ENSMUST00000182346 991 ntBASIC11.52□□□□□ -0.57
Sh3rf2Q8BZT2 Gm43671-201ENSMUST00000200422 433 ntBASIC11.52□□□□□ -0.57
Sh3rf2Q8BZT2 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC11.52□□□□□ -0.57
Sh3rf2Q8BZT2 Gm7082-201ENSMUST00000209880 969 ntBASIC11.52□□□□□ -0.57
Sh3rf2Q8BZT2 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC11.52□□□□□ -0.57
Sh3rf2Q8BZT2 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Sh3rf2Q8BZT2 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC11.52□□□□□ -0.57
Sh3rf2Q8BZT2 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Sh3rf2Q8BZT2 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Sh3rf2Q8BZT2 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sh3rf2Q8BZT2 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sh3rf2Q8BZT2 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sh3rf2Q8BZT2 Rgr-203ENSMUST00000225070 4704 ntBASIC11.52□□□□□ -0.57
Sh3rf2Q8BZT2 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.52□□□□□ -0.57
Sh3rf2Q8BZT2 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sh3rf2Q8BZT2 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Sh3rf2Q8BZT2 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Sh3rf2Q8BZT2 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sh3rf2Q8BZT2 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sh3rf2Q8BZT2 Gm43334-201ENSMUST00000197740 1318 ntBASIC11.52□□□□□ -0.57
Sh3rf2Q8BZT2 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sh3rf2Q8BZT2 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sh3rf2Q8BZT2 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sh3rf2Q8BZT2 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sh3rf2Q8BZT2 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sh3rf2Q8BZT2 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sh3rf2Q8BZT2 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sh3rf2Q8BZT2 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sh3rf2Q8BZT2 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sh3rf2Q8BZT2 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sh3rf2Q8BZT2 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sh3rf2Q8BZT2 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sh3rf2Q8BZT2 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Sh3rf2Q8BZT2 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sh3rf2Q8BZT2 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sh3rf2Q8BZT2 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sh3rf2Q8BZT2 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sh3rf2Q8BZT2 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sh3rf2Q8BZT2 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.51□□□□□ -0.57
Sh3rf2Q8BZT2 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sh3rf2Q8BZT2 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sh3rf2Q8BZT2 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sh3rf2Q8BZT2 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Sh3rf2Q8BZT2 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Sh3rf2Q8BZT2 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sh3rf2Q8BZT2 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sh3rf2Q8BZT2 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC11.51□□□□□ -0.57
Sh3rf2Q8BZT2 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC11.51□□□□□ -0.57
Sh3rf2Q8BZT2 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Sh3rf2Q8BZT2 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sh3rf2Q8BZT2 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC11.51□□□□□ -0.57
Sh3rf2Q8BZT2 Gm43002-201ENSMUST00000200310 155 ntBASIC11.51□□□□□ -0.57
Sh3rf2Q8BZT2 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC11.51□□□□□ -0.57
Sh3rf2Q8BZT2 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Sh3rf2Q8BZT2 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC11.51□□□□□ -0.57
Sh3rf2Q8BZT2 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
Sh3rf2Q8BZT2 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC11.51□□□□□ -0.57
Sh3rf2Q8BZT2 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC11.51□□□□□ -0.57
Sh3rf2Q8BZT2 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sh3rf2Q8BZT2 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
Sh3rf2Q8BZT2 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Sh3rf2Q8BZT2 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sh3rf2Q8BZT2 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Sh3rf2Q8BZT2 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Sh3rf2Q8BZT2 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sh3rf2Q8BZT2 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sh3rf2Q8BZT2 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sh3rf2Q8BZT2 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Sh3rf2Q8BZT2 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sh3rf2Q8BZT2 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.51□□□□□ -0.57
Sh3rf2Q8BZT2 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sh3rf2Q8BZT2 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Sh3rf2Q8BZT2 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sh3rf2Q8BZT2 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sh3rf2Q8BZT2 AC167022.1-201ENSMUST00000218647 1458 ntBASIC11.51□□□□□ -0.57
Sh3rf2Q8BZT2 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sh3rf2Q8BZT2 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms