Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh8Q7TSK3 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh8Q7TSK3 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Pcdh8Q7TSK3 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.24□□□□□ -0.61
Pcdh8Q7TSK3 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh8Q7TSK3 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh8Q7TSK3 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.24□□□□□ -0.61
Pcdh8Q7TSK3 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh8Q7TSK3 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Pcdh8Q7TSK3 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh8Q7TSK3 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh8Q7TSK3 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh8Q7TSK3 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh8Q7TSK3 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Pcdh8Q7TSK3 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.24□□□□□ -0.61
Pcdh8Q7TSK3 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh8Q7TSK3 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh8Q7TSK3 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Pcdh8Q7TSK3 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh8Q7TSK3 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh8Q7TSK3 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh8Q7TSK3 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh8Q7TSK3 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.24□□□□□ -0.61
Pcdh8Q7TSK3 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Pcdh8Q7TSK3 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh8Q7TSK3 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh8Q7TSK3 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Pcdh8Q7TSK3 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh8Q7TSK3 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.23□□□□□ -0.61
Pcdh8Q7TSK3 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh8Q7TSK3 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh8Q7TSK3 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh8Q7TSK3 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC11.23□□□□□ -0.61
Pcdh8Q7TSK3 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh8Q7TSK3 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh8Q7TSK3 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Pcdh8Q7TSK3 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Pcdh8Q7TSK3 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh8Q7TSK3 Gm37859-201ENSMUST00000195529 2173 ntBASIC11.23□□□□□ -0.61
Pcdh8Q7TSK3 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh8Q7TSK3 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh8Q7TSK3 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh8Q7TSK3 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.23□□□□□ -0.61
Pcdh8Q7TSK3 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh8Q7TSK3 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC11.23□□□□□ -0.61
Pcdh8Q7TSK3 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC11.23□□□□□ -0.61
Pcdh8Q7TSK3 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh8Q7TSK3 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh8Q7TSK3 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh8Q7TSK3 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC11.23□□□□□ -0.61
Pcdh8Q7TSK3 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC11.23□□□□□ -0.61
Pcdh8Q7TSK3 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC11.23□□□□□ -0.61
Pcdh8Q7TSK3 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC11.23□□□□□ -0.61
Pcdh8Q7TSK3 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC11.23□□□□□ -0.61
Pcdh8Q7TSK3 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh8Q7TSK3 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh8Q7TSK3 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.23□□□□□ -0.61
Pcdh8Q7TSK3 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh8Q7TSK3 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh8Q7TSK3 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh8Q7TSK3 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh8Q7TSK3 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh8Q7TSK3 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Pcdh8Q7TSK3 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Pcdh8Q7TSK3 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh8Q7TSK3 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Pcdh8Q7TSK3 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh8Q7TSK3 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh8Q7TSK3 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh8Q7TSK3 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC11.23□□□□□ -0.61
Pcdh8Q7TSK3 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdh8Q7TSK3 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Pcdh8Q7TSK3 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdh8Q7TSK3 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Pcdh8Q7TSK3 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdh8Q7TSK3 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdh8Q7TSK3 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdh8Q7TSK3 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdh8Q7TSK3 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.22□□□□□ -0.61
Pcdh8Q7TSK3 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Pcdh8Q7TSK3 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdh8Q7TSK3 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdh8Q7TSK3 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdh8Q7TSK3 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC11.22□□□□□ -0.61
Pcdh8Q7TSK3 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Pcdh8Q7TSK3 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC11.22□□□□□ -0.61
Pcdh8Q7TSK3 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC11.22□□□□□ -0.61
Pcdh8Q7TSK3 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC11.22□□□□□ -0.61
Pcdh8Q7TSK3 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC11.22□□□□□ -0.61
Pcdh8Q7TSK3 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdh8Q7TSK3 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdh8Q7TSK3 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdh8Q7TSK3 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC11.22□□□□□ -0.61
Pcdh8Q7TSK3 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdh8Q7TSK3 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdh8Q7TSK3 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdh8Q7TSK3 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC11.22□□□□□ -0.61
Pcdh8Q7TSK3 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.22□□□□□ -0.61
Pcdh8Q7TSK3 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC11.22□□□□□ -0.61
Pcdh8Q7TSK3 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms