Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smchd1Q6P5D8 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Smchd1Q6P5D8 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC12.38□□□□□ -0.43
Smchd1Q6P5D8 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
Smchd1Q6P5D8 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smchd1Q6P5D8 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smchd1Q6P5D8 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smchd1Q6P5D8 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Smchd1Q6P5D8 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Smchd1Q6P5D8 Gm22877-201ENSMUST00000175451 105 ntBASIC12.38□□□□□ -0.43
Smchd1Q6P5D8 Gm7719-201ENSMUST00000182374 975 ntBASIC12.38□□□□□ -0.43
Smchd1Q6P5D8 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC12.38□□□□□ -0.43
Smchd1Q6P5D8 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC12.38□□□□□ -0.43
Smchd1Q6P5D8 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Smchd1Q6P5D8 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smchd1Q6P5D8 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC12.38□□□□□ -0.43
Smchd1Q6P5D8 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smchd1Q6P5D8 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smchd1Q6P5D8 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smchd1Q6P5D8 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smchd1Q6P5D8 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Smchd1Q6P5D8 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smchd1Q6P5D8 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smchd1Q6P5D8 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smchd1Q6P5D8 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Smchd1Q6P5D8 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Smchd1Q6P5D8 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC12.37□□□□□ -0.43
Smchd1Q6P5D8 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smchd1Q6P5D8 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC12.37□□□□□ -0.43
Smchd1Q6P5D8 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Smchd1Q6P5D8 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Smchd1Q6P5D8 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Smchd1Q6P5D8 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Smchd1Q6P5D8 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Smchd1Q6P5D8 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC12.37□□□□□ -0.43
Smchd1Q6P5D8 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Smchd1Q6P5D8 Gm25951-201ENSMUST00000175330 64 ntBASIC12.37□□□□□ -0.43
Smchd1Q6P5D8 Gm7255-201ENSMUST00000187371 908 ntBASIC12.37□□□□□ -0.43
Smchd1Q6P5D8 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Smchd1Q6P5D8 Gm6677-201ENSMUST00000195100 441 ntBASIC12.37□□□□□ -0.43
Smchd1Q6P5D8 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Smchd1Q6P5D8 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC12.37□□□□□ -0.43
Smchd1Q6P5D8 Gm18035-201ENSMUST00000211962 589 ntBASIC12.37□□□□□ -0.43
Smchd1Q6P5D8 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC12.37□□□□□ -0.43
Smchd1Q6P5D8 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC12.37□□□□□ -0.43
Smchd1Q6P5D8 AC130477.1-201ENSMUST00000226982 420 ntBASIC12.37□□□□□ -0.43
Smchd1Q6P5D8 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smchd1Q6P5D8 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smchd1Q6P5D8 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Smchd1Q6P5D8 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Smchd1Q6P5D8 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Smchd1Q6P5D8 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smchd1Q6P5D8 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smchd1Q6P5D8 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smchd1Q6P5D8 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC12.37□□□□□ -0.43
Smchd1Q6P5D8 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smchd1Q6P5D8 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smchd1Q6P5D8 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Smchd1Q6P5D8 AC090962.2-201ENSMUST00000225064 1801 ntBASIC12.37□□□□□ -0.43
Smchd1Q6P5D8 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smchd1Q6P5D8 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC12.37□□□□□ -0.43
Smchd1Q6P5D8 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smchd1Q6P5D8 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smchd1Q6P5D8 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smchd1Q6P5D8 Gm12986-201ENSMUST00000119037 967 ntBASIC12.37□□□□□ -0.43
Smchd1Q6P5D8 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC12.37□□□□□ -0.43
Smchd1Q6P5D8 Gm22146-201ENSMUST00000157397 288 ntBASIC12.37□□□□□ -0.43
Smchd1Q6P5D8 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Smchd1Q6P5D8 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Smchd1Q6P5D8 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Smchd1Q6P5D8 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Smchd1Q6P5D8 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Smchd1Q6P5D8 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Smchd1Q6P5D8 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC12.37□□□□□ -0.43
Smchd1Q6P5D8 Gm4753-201ENSMUST00000188327 1255 ntBASIC12.37□□□□□ -0.43
Smchd1Q6P5D8 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smchd1Q6P5D8 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC12.37□□□□□ -0.43
Smchd1Q6P5D8 Gm44552-201ENSMUST00000205458 1247 ntBASIC12.37□□□□□ -0.43
Smchd1Q6P5D8 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC12.37□□□□□ -0.43
Smchd1Q6P5D8 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smchd1Q6P5D8 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC12.37□□□□□ -0.43
Smchd1Q6P5D8 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC12.37□□□□□ -0.43
Smchd1Q6P5D8 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smchd1Q6P5D8 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smchd1Q6P5D8 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smchd1Q6P5D8 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smchd1Q6P5D8 Gm44153-201ENSMUST00000204162 1580 ntBASIC12.37□□□□□ -0.43
Smchd1Q6P5D8 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Smchd1Q6P5D8 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smchd1Q6P5D8 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Smchd1Q6P5D8 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Smchd1Q6P5D8 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smchd1Q6P5D8 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smchd1Q6P5D8 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smchd1Q6P5D8 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smchd1Q6P5D8 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smchd1Q6P5D8 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smchd1Q6P5D8 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smchd1Q6P5D8 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Smchd1Q6P5D8 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms