Protein–RNA interactions for Protein: Q2EG98

Pkd1l3, Polycystic kidney disease protein 1-like 3, mousemouse

Predictions only

Length 2,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1l3Q2EG98 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pkd1l3Q2EG98 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Pkd1l3Q2EG98 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pkd1l3Q2EG98 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pkd1l3Q2EG98 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pkd1l3Q2EG98 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Pkd1l3Q2EG98 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC10.18□□□□□ -0.78
Pkd1l3Q2EG98 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Pkd1l3Q2EG98 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Pkd1l3Q2EG98 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pkd1l3Q2EG98 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC10.18□□□□□ -0.78
Pkd1l3Q2EG98 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC10.18□□□□□ -0.78
Pkd1l3Q2EG98 Gm17192-201ENSMUST00000169031 511 ntBASIC10.18□□□□□ -0.78
Pkd1l3Q2EG98 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Pkd1l3Q2EG98 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
Pkd1l3Q2EG98 Gm18463-201ENSMUST00000207258 474 ntBASIC10.18□□□□□ -0.78
Pkd1l3Q2EG98 Gm18460-201ENSMUST00000208088 464 ntBASIC10.18□□□□□ -0.78
Pkd1l3Q2EG98 Gm9102-201ENSMUST00000219250 465 ntBASIC10.18□□□□□ -0.78
Pkd1l3Q2EG98 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pkd1l3Q2EG98 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pkd1l3Q2EG98 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Pkd1l3Q2EG98 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pkd1l3Q2EG98 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Pkd1l3Q2EG98 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Pkd1l3Q2EG98 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pkd1l3Q2EG98 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pkd1l3Q2EG98 Gm44663-201ENSMUST00000206898 3150 ntBASIC10.18□□□□□ -0.78
Pkd1l3Q2EG98 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pkd1l3Q2EG98 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Pkd1l3Q2EG98 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pkd1l3Q2EG98 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Pkd1l3Q2EG98 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pkd1l3Q2EG98 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Pkd1l3Q2EG98 Pde2a-202ENSMUST00000166652 3977 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pkd1l3Q2EG98 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC10.17□□□□□ -0.78
Pkd1l3Q2EG98 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pkd1l3Q2EG98 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pkd1l3Q2EG98 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pkd1l3Q2EG98 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Pkd1l3Q2EG98 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC10.17□□□□□ -0.78
Pkd1l3Q2EG98 Gm6322-201ENSMUST00000118789 1004 ntBASIC10.17□□□□□ -0.78
Pkd1l3Q2EG98 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Pkd1l3Q2EG98 AC154572.1-201ENSMUST00000226098 1204 ntBASIC10.17□□□□□ -0.78
Pkd1l3Q2EG98 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC10.17□□□□□ -0.78
Pkd1l3Q2EG98 Ccdc136-201ENSMUST00000096084 3826 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Pkd1l3Q2EG98 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Pkd1l3Q2EG98 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Pkd1l3Q2EG98 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Pkd1l3Q2EG98 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pkd1l3Q2EG98 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pkd1l3Q2EG98 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pkd1l3Q2EG98 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pkd1l3Q2EG98 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pkd1l3Q2EG98 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
Pkd1l3Q2EG98 Cnppd1-202ENSMUST00000168720 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pkd1l3Q2EG98 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Pkd1l3Q2EG98 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC10.17□□□□□ -0.78
Pkd1l3Q2EG98 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pkd1l3Q2EG98 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pkd1l3Q2EG98 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pkd1l3Q2EG98 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Pkd1l3Q2EG98 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pkd1l3Q2EG98 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pkd1l3Q2EG98 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pkd1l3Q2EG98 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Pkd1l3Q2EG98 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pkd1l3Q2EG98 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pkd1l3Q2EG98 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC10.17□□□□□ -0.78
Pkd1l3Q2EG98 Gm14807-201ENSMUST00000116640 983 ntBASIC10.17□□□□□ -0.78
Pkd1l3Q2EG98 Gm16219-201ENSMUST00000120096 274 ntBASIC10.17□□□□□ -0.78
Pkd1l3Q2EG98 Gm4982-201ENSMUST00000160440 1098 ntBASIC10.17□□□□□ -0.78
Pkd1l3Q2EG98 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Pkd1l3Q2EG98 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC10.17□□□□□ -0.78
Pkd1l3Q2EG98 CT025602.2-201ENSMUST00000226553 772 ntBASIC10.17□□□□□ -0.78
Pkd1l3Q2EG98 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pkd1l3Q2EG98 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pkd1l3Q2EG98 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Pkd1l3Q2EG98 Mir483-201ENSMUST00000093631 73 ntBASIC10.17□□□□□ -0.78
Pkd1l3Q2EG98 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Pkd1l3Q2EG98 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
Pkd1l3Q2EG98 Gm37931-201ENSMUST00000194686 2866 ntBASIC10.17□□□□□ -0.78
Pkd1l3Q2EG98 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pkd1l3Q2EG98 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC10.16□□□□□ -0.78
Pkd1l3Q2EG98 Gm43127-201ENSMUST00000195890 2789 ntBASIC10.16□□□□□ -0.78
Pkd1l3Q2EG98 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC10.16□□□□□ -0.78
Pkd1l3Q2EG98 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Pkd1l3Q2EG98 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Pkd1l3Q2EG98 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
Pkd1l3Q2EG98 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Pkd1l3Q2EG98 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Pkd1l3Q2EG98 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Pkd1l3Q2EG98 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC10.16□□□□□ -0.78
Pkd1l3Q2EG98 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Pkd1l3Q2EG98 Gm11500-201ENSMUST00000118237 601 ntBASIC10.16□□□□□ -0.78
Pkd1l3Q2EG98 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Pkd1l3Q2EG98 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC10.16□□□□□ -0.78
Pkd1l3Q2EG98 Gm42655-201ENSMUST00000202782 1134 ntBASIC10.16□□□□□ -0.78
Pkd1l3Q2EG98 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC10.16□□□□□ -0.78
Pkd1l3Q2EG98 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Pkd1l3Q2EG98 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC10.16□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms