Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Thbs3Q05895 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Thbs3Q05895 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Thbs3Q05895 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Thbs3Q05895 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Thbs3Q05895 Gm13135-201ENSMUST00000117628 3121 ntBASIC9.99□□□□□ -0.81
Thbs3Q05895 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Thbs3Q05895 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Thbs3Q05895 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Thbs3Q05895 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Thbs3Q05895 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC9.99□□□□□ -0.81
Thbs3Q05895 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Thbs3Q05895 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Thbs3Q05895 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Thbs3Q05895 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Thbs3Q05895 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Thbs3Q05895 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Thbs3Q05895 AC166836.1-201ENSMUST00000219933 1795 ntBASIC9.98□□□□□ -0.81
Thbs3Q05895 AC124577.2-201ENSMUST00000217413 2420 ntBASIC9.98□□□□□ -0.81
Thbs3Q05895 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Thbs3Q05895 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Thbs3Q05895 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Thbs3Q05895 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC9.98□□□□□ -0.81
Thbs3Q05895 Gm44663-201ENSMUST00000206898 3150 ntBASIC9.98□□□□□ -0.81
Thbs3Q05895 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Thbs3Q05895 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Thbs3Q05895 Gm37849-201ENSMUST00000194722 1881 ntBASIC9.98□□□□□ -0.81
Thbs3Q05895 Gm2128-201ENSMUST00000108009 2560 ntBASIC9.98□□□□□ -0.81
Thbs3Q05895 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Thbs3Q05895 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC9.98□□□□□ -0.81
Thbs3Q05895 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Thbs3Q05895 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Thbs3Q05895 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Thbs3Q05895 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC9.98□□□□□ -0.81
Thbs3Q05895 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Thbs3Q05895 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Thbs3Q05895 Gm13408-201ENSMUST00000119822 798 ntBASIC9.98□□□□□ -0.81
Thbs3Q05895 Gm13935-201ENSMUST00000121859 798 ntBASIC9.98□□□□□ -0.81
Thbs3Q05895 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC9.98□□□□□ -0.81
Thbs3Q05895 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC9.98□□□□□ -0.81
Thbs3Q05895 Rn7s1-201ENSMUST00000174924 300 ntBASIC9.98□□□□□ -0.81
Thbs3Q05895 Rn7s2-201ENSMUST00000175032 300 ntBASIC9.98□□□□□ -0.81
Thbs3Q05895 Gm26461-201ENSMUST00000175064 290 ntBASIC9.98□□□□□ -0.81
Thbs3Q05895 Gm21092-201ENSMUST00000178995 955 ntBASIC9.98□□□□□ -0.81
Thbs3Q05895 Gm37284-201ENSMUST00000193607 539 ntBASIC9.98□□□□□ -0.81
Thbs3Q05895 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC9.98□□□□□ -0.81
Thbs3Q05895 Gm18393-201ENSMUST00000208349 1131 ntBASIC9.98□□□□□ -0.81
Thbs3Q05895 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Thbs3Q05895 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC9.98□□□□□ -0.81
Thbs3Q05895 Gm6781-201ENSMUST00000038304 1242 ntBASIC9.98□□□□□ -0.81
Thbs3Q05895 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC9.98□□□□□ -0.81
Thbs3Q05895 Gm5879-201ENSMUST00000089501 1209 ntBASIC9.98□□□□□ -0.81
Thbs3Q05895 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC9.98□□□□□ -0.81
Thbs3Q05895 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Thbs3Q05895 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Thbs3Q05895 Gm21998-201ENSMUST00000117552 1308 ntBASIC9.98□□□□□ -0.81
Thbs3Q05895 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Thbs3Q05895 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Thbs3Q05895 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Thbs3Q05895 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Thbs3Q05895 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Thbs3Q05895 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Thbs3Q05895 Gm37969-201ENSMUST00000195777 3409 ntBASIC9.98□□□□□ -0.81
Thbs3Q05895 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Thbs3Q05895 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Thbs3Q05895 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC9.98□□□□□ -0.81
Thbs3Q05895 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Thbs3Q05895 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Thbs3Q05895 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Thbs3Q05895 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Thbs3Q05895 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Thbs3Q05895 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Thbs3Q05895 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC9.97□□□□□ -0.81
Thbs3Q05895 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Thbs3Q05895 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Thbs3Q05895 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Thbs3Q05895 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Thbs3Q05895 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC9.97□□□□□ -0.81
Thbs3Q05895 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Thbs3Q05895 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Thbs3Q05895 Gm12419-201ENSMUST00000116649 636 ntBASIC9.97□□□□□ -0.81
Thbs3Q05895 Gm15573-201ENSMUST00000119487 540 ntBASIC9.97□□□□□ -0.81
Thbs3Q05895 Gm15725-201ENSMUST00000119947 1090 ntBASIC9.97□□□□□ -0.81
Thbs3Q05895 Gm16219-201ENSMUST00000120096 274 ntBASIC9.97□□□□□ -0.81
Thbs3Q05895 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC9.97□□□□□ -0.81
Thbs3Q05895 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Thbs3Q05895 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC9.97□□□□□ -0.81
Thbs3Q05895 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Thbs3Q05895 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC9.97□□□□□ -0.81
Thbs3Q05895 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Thbs3Q05895 Mir6979-201ENSMUST00000183927 56 ntBASIC9.97□□□□□ -0.81
Thbs3Q05895 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Thbs3Q05895 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC9.97□□□□□ -0.81
Thbs3Q05895 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Thbs3Q05895 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC9.97□□□□□ -0.81
Thbs3Q05895 Gm43138-201ENSMUST00000199123 708 ntBASIC9.97□□□□□ -0.81
Thbs3Q05895 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Thbs3Q05895 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Thbs3Q05895 CT030170.2-201ENSMUST00000223267 126 ntBASIC9.97□□□□□ -0.81
Thbs3Q05895 AC115122.1-201ENSMUST00000224850 1040 ntBASIC9.97□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms