Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Col9a1Q05722 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Col9a1Q05722 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Col9a1Q05722 Gm26443-201ENSMUST00000179610 110 ntBASIC11.62□□□□□ -0.55
Col9a1Q05722 Map1lc3b-205ENSMUST00000181948 766 ntTSL 2 BASIC11.62□□□□□ -0.55
Col9a1Q05722 Gm26931-201ENSMUST00000182273 609 ntBASIC11.62□□□□□ -0.55
Col9a1Q05722 Gm21542-201ENSMUST00000182307 993 ntBASIC11.62□□□□□ -0.55
Col9a1Q05722 Gm29360-201ENSMUST00000185625 537 ntTSL 5 BASIC11.62□□□□□ -0.55
Col9a1Q05722 4930444A19Rik-202ENSMUST00000190007 633 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Col9a1Q05722 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Col9a1Q05722 Gm37214-201ENSMUST00000192860 916 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Col9a1Q05722 Gm5851-201ENSMUST00000194132 1204 ntBASIC11.62□□□□□ -0.55
Col9a1Q05722 Gm43460-201ENSMUST00000202491 1057 ntBASIC11.62□□□□□ -0.55
Col9a1Q05722 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC11.62□□□□□ -0.55
Col9a1Q05722 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Col9a1Q05722 Gm44213-201ENSMUST00000204977 703 ntBASIC11.62□□□□□ -0.55
Col9a1Q05722 Gm7587-201ENSMUST00000207618 1021 ntBASIC11.62□□□□□ -0.55
Col9a1Q05722 Gm4903-201ENSMUST00000210462 405 ntBASIC11.62□□□□□ -0.55
Col9a1Q05722 Gm18124-201ENSMUST00000210695 706 ntBASIC11.62□□□□□ -0.55
Col9a1Q05722 Gm4032-203ENSMUST00000211600 531 ntTSL 3 BASIC11.62□□□□□ -0.55
Col9a1Q05722 Gm18035-201ENSMUST00000211962 589 ntBASIC11.62□□□□□ -0.55
Col9a1Q05722 Gm31497-201ENSMUST00000216981 638 ntTSL 5 BASIC11.62□□□□□ -0.55
Col9a1Q05722 AC124503.1-201ENSMUST00000218524 526 ntTSL 3 BASIC11.62□□□□□ -0.55
Col9a1Q05722 AC108945.1-201ENSMUST00000226477 94 ntBASIC11.62□□□□□ -0.55
Col9a1Q05722 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col9a1Q05722 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col9a1Q05722 Serpinb9d-201ENSMUST00000067198 1250 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col9a1Q05722 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col9a1Q05722 Raet1d-201ENSMUST00000095795 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col9a1Q05722 Olfr154-201ENSMUST00000099918 1079 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Col9a1Q05722 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col9a1Q05722 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col9a1Q05722 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col9a1Q05722 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col9a1Q05722 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col9a1Q05722 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Col9a1Q05722 Prss23os-202ENSMUST00000179361 1362 ntBASIC11.62□□□□□ -0.55
Col9a1Q05722 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col9a1Q05722 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Col9a1Q05722 AC154262.2-201ENSMUST00000224310 2293 ntBASIC11.62□□□□□ -0.55
Col9a1Q05722 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col9a1Q05722 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col9a1Q05722 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col9a1Q05722 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col9a1Q05722 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Col9a1Q05722 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col9a1Q05722 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col9a1Q05722 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Col9a1Q05722 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col9a1Q05722 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11.61□□□□□ -0.55
Col9a1Q05722 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC11.61□□□□□ -0.55
Col9a1Q05722 Mettl18-202ENSMUST00000111490 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col9a1Q05722 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Col9a1Q05722 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Col9a1Q05722 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col9a1Q05722 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Col9a1Q05722 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col9a1Q05722 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Col9a1Q05722 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Col9a1Q05722 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Col9a1Q05722 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col9a1Q05722 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Col9a1Q05722 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col9a1Q05722 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Col9a1Q05722 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col9a1Q05722 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col9a1Q05722 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Col9a1Q05722 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col9a1Q05722 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col9a1Q05722 Trbv2-201ENSMUST00000103263 560 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Col9a1Q05722 Olfr1288-201ENSMUST00000104889 939 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Col9a1Q05722 Gm6158-201ENSMUST00000109467 904 ntBASIC11.61□□□□□ -0.55
Col9a1Q05722 Gm4985-201ENSMUST00000118300 1233 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Col9a1Q05722 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Col9a1Q05722 Gm14165-201ENSMUST00000121456 952 ntBASIC11.61□□□□□ -0.55
Col9a1Q05722 Gm15489-201ENSMUST00000132811 973 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Col9a1Q05722 Gm16552-201ENSMUST00000162348 685 ntTSL 3 BASIC11.61□□□□□ -0.55
Col9a1Q05722 Mir3100-201ENSMUST00000174918 65 ntBASIC11.61□□□□□ -0.55
Col9a1Q05722 Vmn2r-ps124-201ENSMUST00000176236 903 ntBASIC11.61□□□□□ -0.55
Col9a1Q05722 Gm5873-201ENSMUST00000177157 1066 ntBASIC11.61□□□□□ -0.55
Col9a1Q05722 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Col9a1Q05722 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col9a1Q05722 Gm36994-201ENSMUST00000192941 492 ntBASIC11.61□□□□□ -0.55
Col9a1Q05722 Gm43163-201ENSMUST00000196571 442 ntBASIC11.61□□□□□ -0.55
Col9a1Q05722 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
Col9a1Q05722 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC11.61□□□□□ -0.55
Col9a1Q05722 CT010575.2-201ENSMUST00000222876 496 ntTSL 2 BASIC11.61□□□□□ -0.55
Col9a1Q05722 AC144733.1-201ENSMUST00000222893 1289 ntBASIC11.61□□□□□ -0.55
Col9a1Q05722 AC134913.2-201ENSMUST00000225017 771 ntBASIC11.61□□□□□ -0.55
Col9a1Q05722 4933427E13Rik-201ENSMUST00000044347 381 ntTSL 5 BASIC11.61□□□□□ -0.55
Col9a1Q05722 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col9a1Q05722 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col9a1Q05722 Esp6-201ENSMUST00000097324 658 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col9a1Q05722 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.61□□□□□ -0.55
Col9a1Q05722 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col9a1Q05722 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Col9a1Q05722 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col9a1Q05722 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col9a1Q05722 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Col9a1Q05722 Olfr121-202ENSMUST00000174675 1494 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms