Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm7293-201ENSMUST00000216682 1007 ntBASIC12.55□□□□□ -0.4
Hmgb1P63158 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC12.55□□□□□ -0.4
Hmgb1P63158 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC12.55□□□□□ -0.4
Hmgb1P63158 AC112945.1-201ENSMUST00000226413 514 ntBASIC12.55□□□□□ -0.4
Hmgb1P63158 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hmgb1P63158 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hmgb1P63158 Gm8385-201ENSMUST00000058999 643 ntBASIC12.55□□□□□ -0.4
Hmgb1P63158 Gm10288-201ENSMUST00000084614 537 ntBASIC12.55□□□□□ -0.4
Hmgb1P63158 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hmgb1P63158 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hmgb1P63158 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hmgb1P63158 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hmgb1P63158 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC12.55□□□□□ -0.4
Hmgb1P63158 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hmgb1P63158 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hmgb1P63158 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hmgb1P63158 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
Hmgb1P63158 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hmgb1P63158 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hmgb1P63158 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hmgb1P63158 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hmgb1P63158 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hmgb1P63158 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Hmgb1P63158 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Hmgb1P63158 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmgb1P63158 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Hmgb1P63158 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmgb1P63158 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmgb1P63158 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmgb1P63158 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmgb1P63158 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC12.54□□□□□ -0.4
Hmgb1P63158 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Hmgb1P63158 AC153380.1-201ENSMUST00000214959 2364 ntBASIC12.54□□□□□ -0.4
Hmgb1P63158 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hmgb1P63158 Gm10110-202ENSMUST00000228705 3220 ntBASIC12.54□□□□□ -0.4
Hmgb1P63158 Ms4a6c-201ENSMUST00000165310 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmgb1P63158 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmgb1P63158 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC12.54□□□□□ -0.4
Hmgb1P63158 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmgb1P63158 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC12.54□□□□□ -0.4
Hmgb1P63158 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC12.54□□□□□ -0.4
Hmgb1P63158 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC12.54□□□□□ -0.4
Hmgb1P63158 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hmgb1P63158 Gm23085-201ENSMUST00000157849 293 ntBASIC12.54□□□□□ -0.4
Hmgb1P63158 Ap1g1-206ENSMUST00000179104 1096 ntBASIC12.54□□□□□ -0.4
Hmgb1P63158 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hmgb1P63158 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Hmgb1P63158 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hmgb1P63158 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmgb1P63158 AC121793.2-201ENSMUST00000217127 2728 ntTSL 5 BASIC12.54□□□□□ -0.4
Hmgb1P63158 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmgb1P63158 Gm5740-201ENSMUST00000211003 1857 ntBASIC12.54□□□□□ -0.4
Hmgb1P63158 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmgb1P63158 Rbbp6-202ENSMUST00000071590 5728 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Hmgb1P63158 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmgb1P63158 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hmgb1P63158 Gm43522-201ENSMUST00000196697 1922 ntBASIC12.54□□□□□ -0.4
Hmgb1P63158 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmgb1P63158 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Hmgb1P63158 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Hmgb1P63158 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmgb1P63158 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmgb1P63158 Gm37600-201ENSMUST00000193764 3292 ntBASIC12.54□□□□□ -0.4
Hmgb1P63158 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmgb1P63158 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmgb1P63158 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmgb1P63158 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgb1P63158 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Hmgb1P63158 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgb1P63158 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgb1P63158 Gm43457-201ENSMUST00000200867 2409 ntBASIC12.53□□□□□ -0.4
Hmgb1P63158 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgb1P63158 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Hmgb1P63158 Gm13135-201ENSMUST00000117628 3121 ntBASIC12.53□□□□□ -0.4
Hmgb1P63158 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgb1P63158 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgb1P63158 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Hmgb1P63158 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgb1P63158 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC12.53□□□□□ -0.4
Hmgb1P63158 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgb1P63158 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Hmgb1P63158 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgb1P63158 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC12.53□□□□□ -0.4
Hmgb1P63158 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgb1P63158 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC12.53□□□□□ -0.4
Hmgb1P63158 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC12.53□□□□□ -0.4
Hmgb1P63158 Gm13916-201ENSMUST00000117368 628 ntBASIC12.53□□□□□ -0.4
Hmgb1P63158 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgb1P63158 Gm13263-201ENSMUST00000121271 838 ntBASIC12.53□□□□□ -0.4
Hmgb1P63158 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Hmgb1P63158 Gm26083-201ENSMUST00000157904 193 ntBASIC12.53□□□□□ -0.4
Hmgb1P63158 Gm8459-201ENSMUST00000162504 760 ntBASIC12.53□□□□□ -0.4
Hmgb1P63158 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC12.53□□□□□ -0.4
Hmgb1P63158 Gm18734-201ENSMUST00000172937 808 ntBASIC12.53□□□□□ -0.4
Hmgb1P63158 Gm4819-201ENSMUST00000182170 1009 ntBASIC12.53□□□□□ -0.4
Hmgb1P63158 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgb1P63158 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgb1P63158 AC122891.1-201ENSMUST00000218671 268 ntBASIC12.53□□□□□ -0.4
Hmgb1P63158 AC102569.1-201ENSMUST00000221563 685 ntBASIC12.53□□□□□ -0.4
Hmgb1P63158 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms