Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC9.99□□□□□ -0.81
Lsm6P62313 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC9.99□□□□□ -0.81
Lsm6P62313 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Lsm6P62313 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Lsm6P62313 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Lsm6P62313 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC9.99□□□□□ -0.81
Lsm6P62313 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Lsm6P62313 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Lsm6P62313 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Lsm6P62313 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Lsm6P62313 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Lsm6P62313 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC9.99□□□□□ -0.81
Lsm6P62313 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Lsm6P62313 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Lsm6P62313 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Lsm6P62313 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Lsm6P62313 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Lsm6P62313 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Lsm6P62313 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Lsm6P62313 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Lsm6P62313 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC9.99□□□□□ -0.81
Lsm6P62313 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Lsm6P62313 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC9.99□□□□□ -0.81
Lsm6P62313 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Lsm6P62313 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Lsm6P62313 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Lsm6P62313 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC9.99□□□□□ -0.81
Lsm6P62313 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Lsm6P62313 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Lsm6P62313 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Lsm6P62313 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Lsm6P62313 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Lsm6P62313 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Lsm6P62313 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Lsm6P62313 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Lsm6P62313 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Lsm6P62313 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Lsm6P62313 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Lsm6P62313 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Lsm6P62313 Gm42463-201ENSMUST00000198041 4886 ntBASIC9.98□□□□□ -0.81
Lsm6P62313 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC9.98□□□□□ -0.81
Lsm6P62313 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Lsm6P62313 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Lsm6P62313 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Lsm6P62313 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC9.98□□□□□ -0.81
Lsm6P62313 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC9.98□□□□□ -0.81
Lsm6P62313 Nudt13-207ENSMUST00000224311 1574 ntBASIC9.98□□□□□ -0.81
Lsm6P62313 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Lsm6P62313 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Lsm6P62313 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Lsm6P62313 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Lsm6P62313 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Lsm6P62313 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Lsm6P62313 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
Lsm6P62313 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC9.98□□□□□ -0.81
Lsm6P62313 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC9.98□□□□□ -0.81
Lsm6P62313 Gm4909-201ENSMUST00000118749 794 ntBASIC9.98□□□□□ -0.81
Lsm6P62313 Gm6397-201ENSMUST00000161973 1069 ntBASIC9.98□□□□□ -0.81
Lsm6P62313 Olfml3-204ENSMUST00000169286 874 ntBASIC9.98□□□□□ -0.81
Lsm6P62313 Gm7741-201ENSMUST00000181445 989 ntBASIC9.98□□□□□ -0.81
Lsm6P62313 Gm5732-201ENSMUST00000182596 1007 ntBASIC9.98□□□□□ -0.81
Lsm6P62313 Mir6927-201ENSMUST00000184494 71 ntBASIC9.98□□□□□ -0.81
Lsm6P62313 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Lsm6P62313 Gm18056-201ENSMUST00000207670 568 ntBASIC9.98□□□□□ -0.81
Lsm6P62313 Gm18061-201ENSMUST00000208350 562 ntBASIC9.98□□□□□ -0.81
Lsm6P62313 Gm18063-201ENSMUST00000208529 568 ntBASIC9.98□□□□□ -0.81
Lsm6P62313 Gm18052-201ENSMUST00000208750 559 ntBASIC9.98□□□□□ -0.81
Lsm6P62313 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC9.98□□□□□ -0.81
Lsm6P62313 Gm5996-201ENSMUST00000211110 718 ntBASIC9.98□□□□□ -0.81
Lsm6P62313 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC9.98□□□□□ -0.81
Lsm6P62313 AC102569.1-201ENSMUST00000221563 685 ntBASIC9.98□□□□□ -0.81
Lsm6P62313 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Lsm6P62313 Gm7551-201ENSMUST00000089593 1074 ntBASIC9.98□□□□□ -0.81
Lsm6P62313 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Lsm6P62313 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Lsm6P62313 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC9.98□□□□□ -0.81
Lsm6P62313 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Lsm6P62313 Gm37422-201ENSMUST00000193794 4718 ntBASIC9.98□□□□□ -0.81
Lsm6P62313 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Lsm6P62313 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC9.98□□□□□ -0.81
Lsm6P62313 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Lsm6P62313 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Lsm6P62313 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Lsm6P62313 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Lsm6P62313 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Lsm6P62313 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Lsm6P62313 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Lsm6P62313 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Lsm6P62313 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Lsm6P62313 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Lsm6P62313 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC9.98□□□□□ -0.81
Lsm6P62313 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC9.98□□□□□ -0.81
Lsm6P62313 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Lsm6P62313 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Lsm6P62313 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC9.98□□□□□ -0.81
Lsm6P62313 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Lsm6P62313 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Lsm6P62313 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Lsm6P62313 Gm43522-201ENSMUST00000196697 1922 ntBASIC9.97□□□□□ -0.81
Lsm6P62313 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms