Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Gm42588-201ENSMUST00000200538 1297 ntBASIC10.85□□□□□ -0.67
Cdkn2bP55271 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdkn2bP55271 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdkn2bP55271 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cdkn2bP55271 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC10.85□□□□□ -0.67
Cdkn2bP55271 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdkn2bP55271 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdkn2bP55271 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cdkn2bP55271 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdkn2bP55271 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdkn2bP55271 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdkn2bP55271 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdkn2bP55271 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdkn2bP55271 Gm13812-201ENSMUST00000118061 1347 ntBASIC10.84□□□□□ -0.67
Cdkn2bP55271 Gm13810-201ENSMUST00000118584 1347 ntBASIC10.84□□□□□ -0.67
Cdkn2bP55271 Gm5171-201ENSMUST00000214944 1415 ntBASIC10.84□□□□□ -0.67
Cdkn2bP55271 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC10.84□□□□□ -0.67
Cdkn2bP55271 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Cdkn2bP55271 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdkn2bP55271 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Cdkn2bP55271 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Cdkn2bP55271 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cdkn2bP55271 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdkn2bP55271 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Cdkn2bP55271 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Cdkn2bP55271 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdkn2bP55271 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdkn2bP55271 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdkn2bP55271 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdkn2bP55271 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC10.84□□□□□ -0.67
Cdkn2bP55271 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Cdkn2bP55271 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdkn2bP55271 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Cdkn2bP55271 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdkn2bP55271 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC10.84□□□□□ -0.67
Cdkn2bP55271 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cdkn2bP55271 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cdkn2bP55271 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cdkn2bP55271 Gm24749-201ENSMUST00000157838 343 ntBASIC10.84□□□□□ -0.67
Cdkn2bP55271 Gm18734-201ENSMUST00000172937 808 ntBASIC10.84□□□□□ -0.67
Cdkn2bP55271 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Cdkn2bP55271 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC10.84□□□□□ -0.67
Cdkn2bP55271 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdkn2bP55271 Gm37597-201ENSMUST00000191853 382 ntBASIC10.84□□□□□ -0.67
Cdkn2bP55271 Gm37259-201ENSMUST00000193903 849 ntBASIC10.84□□□□□ -0.67
Cdkn2bP55271 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cdkn2bP55271 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Cdkn2bP55271 Gm6108-201ENSMUST00000208365 367 ntBASIC10.84□□□□□ -0.67
Cdkn2bP55271 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC10.84□□□□□ -0.67
Cdkn2bP55271 AC159002.1-201ENSMUST00000226714 924 ntBASIC10.84□□□□□ -0.67
Cdkn2bP55271 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Cdkn2bP55271 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Cdkn2bP55271 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdkn2bP55271 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdkn2bP55271 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdkn2bP55271 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdkn2bP55271 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC10.84□□□□□ -0.67
Cdkn2bP55271 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdkn2bP55271 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdkn2bP55271 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cdkn2bP55271 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdkn2bP55271 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdkn2bP55271 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdkn2bP55271 Gm37613-201ENSMUST00000195677 3580 ntBASIC10.84□□□□□ -0.67
Cdkn2bP55271 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Cdkn2bP55271 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdkn2bP55271 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdkn2bP55271 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdkn2bP55271 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cdkn2bP55271 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdkn2bP55271 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdkn2bP55271 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
Cdkn2bP55271 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.67
Cdkn2bP55271 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Cdkn2bP55271 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdkn2bP55271 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdkn2bP55271 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdkn2bP55271 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdkn2bP55271 Gm45041-201ENSMUST00000207366 3108 ntBASIC10.83□□□□□ -0.68
Cdkn2bP55271 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdkn2bP55271 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cdkn2bP55271 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
Cdkn2bP55271 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cdkn2bP55271 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cdkn2bP55271 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Cdkn2bP55271 Gm42853-201ENSMUST00000201273 1387 ntBASIC10.83□□□□□ -0.68
Cdkn2bP55271 Gm18222-201ENSMUST00000202416 1387 ntBASIC10.83□□□□□ -0.68
Cdkn2bP55271 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC10.83□□□□□ -0.68
Cdkn2bP55271 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdkn2bP55271 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cdkn2bP55271 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Cdkn2bP55271 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Cdkn2bP55271 Gm15374-201ENSMUST00000119313 844 ntBASIC10.83□□□□□ -0.68
Cdkn2bP55271 Mup-ps29-201ENSMUST00000122281 202 ntBASIC10.83□□□□□ -0.68
Cdkn2bP55271 Mir1896-201ENSMUST00000122641 81 ntBASIC10.83□□□□□ -0.68
Cdkn2bP55271 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC10.83□□□□□ -0.68
Cdkn2bP55271 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cdkn2bP55271 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cdkn2bP55271 Gm25890-201ENSMUST00000177643 165 ntBASIC10.83□□□□□ -0.68
Cdkn2bP55271 Rnu1b2-201ENSMUST00000178073 165 ntBASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms