Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vps4bP46467 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Vps4bP46467 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vps4bP46467 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vps4bP46467 Gm13910-201ENSMUST00000121752 1428 ntBASIC11.53□□□□□ -0.56
Vps4bP46467 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.53□□□□□ -0.56
Vps4bP46467 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vps4bP46467 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Vps4bP46467 Gm43522-201ENSMUST00000196697 1922 ntBASIC11.53□□□□□ -0.56
Vps4bP46467 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vps4bP46467 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vps4bP46467 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC11.53□□□□□ -0.56
Vps4bP46467 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vps4bP46467 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vps4bP46467 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC11.53□□□□□ -0.56
Vps4bP46467 Gm14208-201ENSMUST00000119645 678 ntBASIC11.53□□□□□ -0.56
Vps4bP46467 Gm12129-201ENSMUST00000120104 1147 ntBASIC11.53□□□□□ -0.56
Vps4bP46467 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC11.53□□□□□ -0.56
Vps4bP46467 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC11.53□□□□□ -0.56
Vps4bP46467 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Vps4bP46467 Gm25881-201ENSMUST00000157783 103 ntBASIC11.53□□□□□ -0.56
Vps4bP46467 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC11.53□□□□□ -0.56
Vps4bP46467 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
Vps4bP46467 Gm37835-201ENSMUST00000193305 361 ntBASIC11.53□□□□□ -0.56
Vps4bP46467 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC11.53□□□□□ -0.56
Vps4bP46467 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Vps4bP46467 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC11.53□□□□□ -0.56
Vps4bP46467 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Vps4bP46467 Gm18556-201ENSMUST00000219748 1031 ntBASIC11.53□□□□□ -0.56
Vps4bP46467 Gm10288-201ENSMUST00000084614 537 ntBASIC11.53□□□□□ -0.56
Vps4bP46467 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vps4bP46467 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vps4bP46467 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vps4bP46467 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vps4bP46467 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Vps4bP46467 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Vps4bP46467 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vps4bP46467 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Vps4bP46467 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Vps4bP46467 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Vps4bP46467 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vps4bP46467 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Vps4bP46467 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Vps4bP46467 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC11.53□□□□□ -0.56
Vps4bP46467 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Vps4bP46467 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vps4bP46467 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Vps4bP46467 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vps4bP46467 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vps4bP46467 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC11.52□□□□□ -0.56
Vps4bP46467 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Vps4bP46467 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Vps4bP46467 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Vps4bP46467 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Vps4bP46467 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Vps4bP46467 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Vps4bP46467 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC11.52□□□□□ -0.57
Vps4bP46467 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC11.52□□□□□ -0.57
Vps4bP46467 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Vps4bP46467 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Vps4bP46467 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Vps4bP46467 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC11.52□□□□□ -0.57
Vps4bP46467 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Vps4bP46467 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Vps4bP46467 Gm13611-201ENSMUST00000118269 318 ntBASIC11.52□□□□□ -0.57
Vps4bP46467 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC11.52□□□□□ -0.57
Vps4bP46467 Gm23085-201ENSMUST00000157849 293 ntBASIC11.52□□□□□ -0.57
Vps4bP46467 Gm20426-201ENSMUST00000173657 440 ntBASIC11.52□□□□□ -0.57
Vps4bP46467 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC11.52□□□□□ -0.57
Vps4bP46467 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC11.52□□□□□ -0.57
Vps4bP46467 Gm44100-201ENSMUST00000204329 436 ntBASIC11.52□□□□□ -0.57
Vps4bP46467 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC11.52□□□□□ -0.57
Vps4bP46467 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC11.52□□□□□ -0.57
Vps4bP46467 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC11.52□□□□□ -0.57
Vps4bP46467 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC11.52□□□□□ -0.57
Vps4bP46467 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC11.52□□□□□ -0.57
Vps4bP46467 CT025694.1-201ENSMUST00000226188 934 ntBASIC11.52□□□□□ -0.57
Vps4bP46467 AC112945.1-201ENSMUST00000226413 514 ntBASIC11.52□□□□□ -0.57
Vps4bP46467 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Vps4bP46467 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Vps4bP46467 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Vps4bP46467 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Vps4bP46467 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Vps4bP46467 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Vps4bP46467 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Vps4bP46467 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Vps4bP46467 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Vps4bP46467 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Vps4bP46467 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Vps4bP46467 Gm5740-201ENSMUST00000211003 1857 ntBASIC11.52□□□□□ -0.57
Vps4bP46467 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Vps4bP46467 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Vps4bP46467 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Vps4bP46467 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Vps4bP46467 Gm13812-201ENSMUST00000118061 1347 ntBASIC11.52□□□□□ -0.57
Vps4bP46467 Gm13810-201ENSMUST00000118584 1347 ntBASIC11.52□□□□□ -0.57
Vps4bP46467 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Vps4bP46467 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC11.52□□□□□ -0.57
Vps4bP46467 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Vps4bP46467 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms