Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdx2P43241 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdx2P43241 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdx2P43241 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdx2P43241 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cdx2P43241 Gm17435-202ENSMUST00000212699 1998 ntBASIC10.81□□□□□ -0.68
Cdx2P43241 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdx2P43241 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Cdx2P43241 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdx2P43241 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdx2P43241 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdx2P43241 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Cdx2P43241 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC10.81□□□□□ -0.68
Cdx2P43241 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdx2P43241 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cdx2P43241 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdx2P43241 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdx2P43241 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cdx2P43241 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdx2P43241 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Cdx2P43241 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cdx2P43241 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdx2P43241 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cdx2P43241 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC10.8□□□□□ -0.68
Cdx2P43241 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdx2P43241 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdx2P43241 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdx2P43241 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdx2P43241 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdx2P43241 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdx2P43241 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdx2P43241 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Cdx2P43241 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cdx2P43241 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cdx2P43241 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC10.8□□□□□ -0.68
Cdx2P43241 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdx2P43241 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdx2P43241 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC10.8□□□□□ -0.68
Cdx2P43241 Gm15617-201ENSMUST00000118973 771 ntBASIC10.8□□□□□ -0.68
Cdx2P43241 Gm3828-201ENSMUST00000121817 257 ntBASIC10.8□□□□□ -0.68
Cdx2P43241 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cdx2P43241 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC10.8□□□□□ -0.68
Cdx2P43241 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC10.8□□□□□ -0.68
Cdx2P43241 Gm19246-201ENSMUST00000173599 255 ntBASIC10.8□□□□□ -0.68
Cdx2P43241 Gm25998-201ENSMUST00000175397 53 ntBASIC10.8□□□□□ -0.68
Cdx2P43241 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Cdx2P43241 Gm5267-201ENSMUST00000191574 1045 ntBASIC10.8□□□□□ -0.68
Cdx2P43241 Gm37782-201ENSMUST00000194879 678 ntBASIC10.8□□□□□ -0.68
Cdx2P43241 Gm43547-201ENSMUST00000197729 328 ntBASIC10.8□□□□□ -0.68
Cdx2P43241 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC10.8□□□□□ -0.68
Cdx2P43241 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdx2P43241 Gm3318-201ENSMUST00000217604 1183 ntBASIC10.8□□□□□ -0.68
Cdx2P43241 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC10.8□□□□□ -0.68
Cdx2P43241 Gm14005-208ENSMUST00000223654 681 ntBASIC10.8□□□□□ -0.68
Cdx2P43241 CT030652.1-201ENSMUST00000227377 1235 ntBASIC10.8□□□□□ -0.68
Cdx2P43241 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdx2P43241 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdx2P43241 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdx2P43241 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Cdx2P43241 Gm10020-201ENSMUST00000081993 612 ntBASIC10.8□□□□□ -0.68
Cdx2P43241 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Cdx2P43241 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cdx2P43241 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdx2P43241 Gm42499-201ENSMUST00000196193 1412 ntBASIC10.8□□□□□ -0.68
Cdx2P43241 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cdx2P43241 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdx2P43241 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Cdx2P43241 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdx2P43241 Gm27177-202ENSMUST00000183514 2703 ntBASIC10.8□□□□□ -0.68
Cdx2P43241 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdx2P43241 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cdx2P43241 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Cdx2P43241 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdx2P43241 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdx2P43241 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cdx2P43241 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdx2P43241 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Cdx2P43241 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Cdx2P43241 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cdx2P43241 Gm42480-201ENSMUST00000198434 2595 ntBASIC10.79□□□□□ -0.68
Cdx2P43241 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cdx2P43241 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cdx2P43241 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cdx2P43241 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cdx2P43241 Gm45743-201ENSMUST00000212701 2795 ntBASIC10.79□□□□□ -0.68
Cdx2P43241 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cdx2P43241 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Cdx2P43241 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cdx2P43241 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Cdx2P43241 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Cdx2P43241 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cdx2P43241 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cdx2P43241 Gm37122-201ENSMUST00000195313 1567 ntBASIC10.79□□□□□ -0.68
Cdx2P43241 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cdx2P43241 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cdx2P43241 Gm14005-210ENSMUST00000225087 1413 ntBASIC10.79□□□□□ -0.68
Cdx2P43241 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Cdx2P43241 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Cdx2P43241 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC10.79□□□□□ -0.68
Cdx2P43241 Gm15136-201ENSMUST00000120552 533 ntBASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 1028.2 ms