Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 AC121960.1-201ENSMUST00000227982 564 ntBASIC10.69□□□□□ -0.7
Sox6P40645 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sox6P40645 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sox6P40645 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sox6P40645 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sox6P40645 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sox6P40645 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sox6P40645 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Sox6P40645 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sox6P40645 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Sox6P40645 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sox6P40645 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Sox6P40645 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sox6P40645 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Sox6P40645 Gm44152-201ENSMUST00000205007 1691 ntBASIC10.69□□□□□ -0.7
Sox6P40645 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC10.69□□□□□ -0.7
Sox6P40645 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sox6P40645 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC10.69□□□□□ -0.7
Sox6P40645 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC10.69□□□□□ -0.7
Sox6P40645 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sox6P40645 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sox6P40645 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Sox6P40645 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sox6P40645 Ube3a-203ENSMUST00000200758 9856 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sox6P40645 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC10.68□□□□□ -0.7
Sox6P40645 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sox6P40645 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC10.68□□□□□ -0.7
Sox6P40645 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sox6P40645 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC10.68□□□□□ -0.7
Sox6P40645 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sox6P40645 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sox6P40645 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sox6P40645 Gm9796-201ENSMUST00000062249 2250 ntBASIC10.68□□□□□ -0.7
Sox6P40645 Atad5-201ENSMUST00000017694 7272 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sox6P40645 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC10.68□□□□□ -0.7
Sox6P40645 Setbp1-201ENSMUST00000025430 9953 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Sox6P40645 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sox6P40645 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sox6P40645 Gm10152-201ENSMUST00000193475 1344 ntBASIC10.68□□□□□ -0.7
Sox6P40645 Dysf-202ENSMUST00000089595 6613 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Sox6P40645 AC173482.6-201ENSMUST00000225889 1741 ntBASIC10.68□□□□□ -0.7
Sox6P40645 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sox6P40645 Gm15236-201ENSMUST00000117309 379 ntBASIC10.68□□□□□ -0.7
Sox6P40645 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC10.68□□□□□ -0.7
Sox6P40645 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sox6P40645 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC10.68□□□□□ -0.7
Sox6P40645 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Sox6P40645 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sox6P40645 Gstp-ps-201ENSMUST00000195526 631 ntBASIC10.68□□□□□ -0.7
Sox6P40645 Gm42629-201ENSMUST00000199063 1102 ntBASIC10.68□□□□□ -0.7
Sox6P40645 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC10.68□□□□□ -0.7
Sox6P40645 Gm18056-201ENSMUST00000207670 568 ntBASIC10.68□□□□□ -0.7
Sox6P40645 Gm18061-201ENSMUST00000208350 562 ntBASIC10.68□□□□□ -0.7
Sox6P40645 Gm18063-201ENSMUST00000208529 568 ntBASIC10.68□□□□□ -0.7
Sox6P40645 Gm18052-201ENSMUST00000208750 559 ntBASIC10.68□□□□□ -0.7
Sox6P40645 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Sox6P40645 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sox6P40645 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sox6P40645 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Sox6P40645 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sox6P40645 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sox6P40645 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sox6P40645 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sox6P40645 Cacna1f-201ENSMUST00000115725 6028 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Sox6P40645 Nhsl1-202ENSMUST00000100054 6795 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Sox6P40645 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC10.68□□□□□ -0.7
Sox6P40645 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sox6P40645 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sox6P40645 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox6P40645 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sox6P40645 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Sox6P40645 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox6P40645 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Sox6P40645 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox6P40645 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox6P40645 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sox6P40645 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox6P40645 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox6P40645 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox6P40645 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox6P40645 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sox6P40645 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sox6P40645 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sox6P40645 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
Sox6P40645 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox6P40645 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox6P40645 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox6P40645 AC129336.1-201ENSMUST00000220224 2277 ntBASIC10.67□□□□□ -0.7
Sox6P40645 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC10.67□□□□□ -0.7
Sox6P40645 Gm23949-201ENSMUST00000104027 127 ntBASIC10.67□□□□□ -0.7
Sox6P40645 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox6P40645 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sox6P40645 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC10.67□□□□□ -0.7
Sox6P40645 Gm15711-201ENSMUST00000118889 535 ntBASIC10.67□□□□□ -0.7
Sox6P40645 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC10.67□□□□□ -0.7
Sox6P40645 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC10.67□□□□□ -0.7
Sox6P40645 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox6P40645 Gm8343-201ENSMUST00000182705 994 ntBASIC10.67□□□□□ -0.7
Sox6P40645 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sox6P40645 Gm29199-201ENSMUST00000187766 775 ntBASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms