Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 AC122273.1-201ENSMUST00000213634 2327 ntBASIC11.21□□□□□ -0.62
Cd9P40240 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cd9P40240 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cd9P40240 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cd9P40240 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cd9P40240 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cd9P40240 Gm38292-201ENSMUST00000192646 3045 ntBASIC11.21□□□□□ -0.62
Cd9P40240 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cd9P40240 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cd9P40240 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cd9P40240 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cd9P40240 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cd9P40240 Gm8752-201ENSMUST00000173427 1694 ntBASIC11.2□□□□□ -0.62
Cd9P40240 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cd9P40240 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cd9P40240 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Cd9P40240 Gm37651-201ENSMUST00000194679 1494 ntBASIC11.2□□□□□ -0.62
Cd9P40240 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.2□□□□□ -0.62
Cd9P40240 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC11.2□□□□□ -0.62
Cd9P40240 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Cd9P40240 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cd9P40240 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cd9P40240 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cd9P40240 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cd9P40240 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cd9P40240 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cd9P40240 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cd9P40240 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Cd9P40240 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Cd9P40240 Gm11956-201ENSMUST00000119525 512 ntBASIC11.2□□□□□ -0.62
Cd9P40240 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cd9P40240 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cd9P40240 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC11.2□□□□□ -0.62
Cd9P40240 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cd9P40240 Mir8115-201ENSMUST00000184992 119 ntBASIC11.2□□□□□ -0.62
Cd9P40240 Gm43667-201ENSMUST00000198616 1095 ntBASIC11.2□□□□□ -0.62
Cd9P40240 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cd9P40240 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC11.2□□□□□ -0.62
Cd9P40240 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Cd9P40240 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cd9P40240 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cd9P40240 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Cd9P40240 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Cd9P40240 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cd9P40240 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Cd9P40240 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cd9P40240 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cd9P40240 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cd9P40240 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cd9P40240 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cd9P40240 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Cd9P40240 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cd9P40240 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cd9P40240 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cd9P40240 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cd9P40240 Gm43152-201ENSMUST00000202495 1638 ntBASIC11.2□□□□□ -0.62
Cd9P40240 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cd9P40240 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cd9P40240 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cd9P40240 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cd9P40240 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cd9P40240 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.19□□□□□ -0.62
Cd9P40240 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cd9P40240 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
Cd9P40240 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cd9P40240 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cd9P40240 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.19□□□□□ -0.62
Cd9P40240 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cd9P40240 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cd9P40240 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cd9P40240 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cd9P40240 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cd9P40240 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
Cd9P40240 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cd9P40240 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cd9P40240 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Cd9P40240 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cd9P40240 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cd9P40240 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cd9P40240 Gm18798-201ENSMUST00000187264 1700 ntBASIC11.19□□□□□ -0.62
Cd9P40240 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC11.19□□□□□ -0.62
Cd9P40240 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cd9P40240 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC11.19□□□□□ -0.62
Cd9P40240 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC11.19□□□□□ -0.62
Cd9P40240 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Cd9P40240 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cd9P40240 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC11.19□□□□□ -0.62
Cd9P40240 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC11.19□□□□□ -0.62
Cd9P40240 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cd9P40240 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Cd9P40240 Gm9244-201ENSMUST00000056767 2129 ntBASIC11.19□□□□□ -0.62
Cd9P40240 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cd9P40240 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cd9P40240 Gm37368-201ENSMUST00000193173 3212 ntBASIC11.19□□□□□ -0.62
Cd9P40240 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cd9P40240 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cd9P40240 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cd9P40240 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Cd9P40240 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cd9P40240 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms