Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hmgn1P18608 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hmgn1P18608 AC149588.2-201ENSMUST00000228182 1859 ntBASIC10.36□□□□□ -0.75
Hmgn1P18608 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hmgn1P18608 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hmgn1P18608 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Hmgn1P18608 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hmgn1P18608 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Hmgn1P18608 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hmgn1P18608 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hmgn1P18608 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Hmgn1P18608 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hmgn1P18608 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Hmgn1P18608 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hmgn1P18608 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hmgn1P18608 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hmgn1P18608 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hmgn1P18608 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hmgn1P18608 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC10.35□□□□□ -0.75
Hmgn1P18608 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hmgn1P18608 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hmgn1P18608 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hmgn1P18608 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Hmgn1P18608 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC10.35□□□□□ -0.75
Hmgn1P18608 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hmgn1P18608 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hmgn1P18608 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hmgn1P18608 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hmgn1P18608 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Hmgn1P18608 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hmgn1P18608 Gm11509-201ENSMUST00000117358 325 ntBASIC10.35□□□□□ -0.75
Hmgn1P18608 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hmgn1P18608 Trav4d-2-201ENSMUST00000120914 335 ntBASIC10.35□□□□□ -0.75
Hmgn1P18608 Gm11424-201ENSMUST00000121929 829 ntBASIC10.35□□□□□ -0.75
Hmgn1P18608 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC10.35□□□□□ -0.75
Hmgn1P18608 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Hmgn1P18608 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hmgn1P18608 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC10.35□□□□□ -0.75
Hmgn1P18608 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC10.35□□□□□ -0.75
Hmgn1P18608 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Hmgn1P18608 Gm6621-201ENSMUST00000193251 772 ntBASIC10.35□□□□□ -0.75
Hmgn1P18608 Gm5852-201ENSMUST00000194119 1021 ntBASIC10.35□□□□□ -0.75
Hmgn1P18608 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Hmgn1P18608 AC130829.1-201ENSMUST00000221548 494 ntBASIC10.35□□□□□ -0.75
Hmgn1P18608 AC140375.2-201ENSMUST00000225283 584 ntBASIC10.35□□□□□ -0.75
Hmgn1P18608 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Hmgn1P18608 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hmgn1P18608 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hmgn1P18608 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hmgn1P18608 Gm43860-201ENSMUST00000201742 2705 ntBASIC10.35□□□□□ -0.75
Hmgn1P18608 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hmgn1P18608 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hmgn1P18608 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hmgn1P18608 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hmgn1P18608 Gm6124-201ENSMUST00000188240 2580 ntBASIC10.35□□□□□ -0.75
Hmgn1P18608 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Hmgn1P18608 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hmgn1P18608 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hmgn1P18608 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC10.35□□□□□ -0.75
Hmgn1P18608 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Hmgn1P18608 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Hmgn1P18608 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hmgn1P18608 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hmgn1P18608 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Hmgn1P18608 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Hmgn1P18608 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hmgn1P18608 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Hmgn1P18608 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hmgn1P18608 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hmgn1P18608 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Hmgn1P18608 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hmgn1P18608 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Hmgn1P18608 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Hmgn1P18608 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hmgn1P18608 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Hmgn1P18608 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Hmgn1P18608 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hmgn1P18608 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC10.34□□□□□ -0.75
Hmgn1P18608 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hmgn1P18608 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
Hmgn1P18608 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Hmgn1P18608 Gm37031-201ENSMUST00000195487 2530 ntBASIC10.34□□□□□ -0.75
Hmgn1P18608 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hmgn1P18608 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hmgn1P18608 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC10.34□□□□□ -0.75
Hmgn1P18608 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC10.34□□□□□ -0.75
Hmgn1P18608 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Hmgn1P18608 Gm24074-201ENSMUST00000158178 260 ntBASIC10.34□□□□□ -0.75
Hmgn1P18608 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Hmgn1P18608 Gm5616-201ENSMUST00000165252 384 ntBASIC10.34□□□□□ -0.75
Hmgn1P18608 Gm8741-201ENSMUST00000174736 384 ntBASIC10.34□□□□□ -0.75
Hmgn1P18608 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Hmgn1P18608 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC10.34□□□□□ -0.75
Hmgn1P18608 Gm5745-201ENSMUST00000183748 313 ntBASIC10.34□□□□□ -0.75
Hmgn1P18608 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC10.34□□□□□ -0.75
Hmgn1P18608 Gm37301-201ENSMUST00000195412 568 ntBASIC10.34□□□□□ -0.75
Hmgn1P18608 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hmgn1P18608 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
Hmgn1P18608 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC10.34□□□□□ -0.75
Hmgn1P18608 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms