Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Chmp6P0C0A3 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC12.39□□□□□ -0.43
Chmp6P0C0A3 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chmp6P0C0A3 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC12.39□□□□□ -0.43
Chmp6P0C0A3 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Chmp6P0C0A3 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chmp6P0C0A3 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Chmp6P0C0A3 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp6P0C0A3 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp6P0C0A3 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Chmp6P0C0A3 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp6P0C0A3 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp6P0C0A3 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp6P0C0A3 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC12.38□□□□□ -0.43
Chmp6P0C0A3 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Chmp6P0C0A3 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp6P0C0A3 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp6P0C0A3 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp6P0C0A3 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp6P0C0A3 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp6P0C0A3 Gm7841-201ENSMUST00000122108 1629 ntBASIC12.38□□□□□ -0.43
Chmp6P0C0A3 Gm3836-201ENSMUST00000211377 1613 ntBASIC12.38□□□□□ -0.43
Chmp6P0C0A3 Gm13408-201ENSMUST00000119822 798 ntBASIC12.38□□□□□ -0.43
Chmp6P0C0A3 Gm13935-201ENSMUST00000121859 798 ntBASIC12.38□□□□□ -0.43
Chmp6P0C0A3 n-R5s14-201ENSMUST00000122688 107 ntBASIC12.38□□□□□ -0.43
Chmp6P0C0A3 Gm22144-201ENSMUST00000157402 102 ntBASIC12.38□□□□□ -0.43
Chmp6P0C0A3 Gm3150-201ENSMUST00000166418 204 ntBASIC12.38□□□□□ -0.43
Chmp6P0C0A3 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp6P0C0A3 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp6P0C0A3 Gm34767-201ENSMUST00000191813 1062 ntBASIC12.38□□□□□ -0.43
Chmp6P0C0A3 Gm8959-201ENSMUST00000213150 571 ntBASIC12.38□□□□□ -0.43
Chmp6P0C0A3 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp6P0C0A3 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Chmp6P0C0A3 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Chmp6P0C0A3 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp6P0C0A3 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp6P0C0A3 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp6P0C0A3 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp6P0C0A3 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp6P0C0A3 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Chmp6P0C0A3 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp6P0C0A3 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp6P0C0A3 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp6P0C0A3 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp6P0C0A3 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC12.37□□□□□ -0.43
Chmp6P0C0A3 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Chmp6P0C0A3 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Chmp6P0C0A3 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp6P0C0A3 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Chmp6P0C0A3 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp6P0C0A3 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Chmp6P0C0A3 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp6P0C0A3 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp6P0C0A3 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp6P0C0A3 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC12.37□□□□□ -0.43
Chmp6P0C0A3 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp6P0C0A3 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Chmp6P0C0A3 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Chmp6P0C0A3 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp6P0C0A3 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp6P0C0A3 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp6P0C0A3 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Chmp6P0C0A3 Gm4726-201ENSMUST00000135604 736 ntBASIC12.37□□□□□ -0.43
Chmp6P0C0A3 Gm6019-201ENSMUST00000148369 736 ntBASIC12.37□□□□□ -0.43
Chmp6P0C0A3 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp6P0C0A3 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC12.37□□□□□ -0.43
Chmp6P0C0A3 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC12.37□□□□□ -0.43
Chmp6P0C0A3 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC12.37□□□□□ -0.43
Chmp6P0C0A3 Gm38314-201ENSMUST00000195709 625 ntBASIC12.37□□□□□ -0.43
Chmp6P0C0A3 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp6P0C0A3 Gm18393-201ENSMUST00000208349 1131 ntBASIC12.37□□□□□ -0.43
Chmp6P0C0A3 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp6P0C0A3 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC12.37□□□□□ -0.43
Chmp6P0C0A3 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC12.37□□□□□ -0.43
Chmp6P0C0A3 AC112945.1-201ENSMUST00000226413 514 ntBASIC12.37□□□□□ -0.43
Chmp6P0C0A3 Gm6781-201ENSMUST00000038304 1242 ntBASIC12.37□□□□□ -0.43
Chmp6P0C0A3 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Chmp6P0C0A3 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp6P0C0A3 Gm13347-201ENSMUST00000120298 1353 ntBASIC12.37□□□□□ -0.43
Chmp6P0C0A3 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Chmp6P0C0A3 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp6P0C0A3 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp6P0C0A3 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp6P0C0A3 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp6P0C0A3 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp6P0C0A3 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Chmp6P0C0A3 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp6P0C0A3 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp6P0C0A3 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Chmp6P0C0A3 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp6P0C0A3 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp6P0C0A3 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp6P0C0A3 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp6P0C0A3 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp6P0C0A3 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp6P0C0A3 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp6P0C0A3 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp6P0C0A3 n-R5s64-201ENSMUST00000102019 119 ntBASIC12.36□□□□□ -0.43
Chmp6P0C0A3 Gm14193-201ENSMUST00000105067 153 ntBASIC12.36□□□□□ -0.43
Chmp6P0C0A3 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms