Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC11.11□□□□□ -0.63
Npc1O35604 AC129219.2-201ENSMUST00000224324 701 ntBASIC11.11□□□□□ -0.63
Npc1O35604 AC135114.1-201ENSMUST00000228682 270 ntBASIC11.11□□□□□ -0.63
Npc1O35604 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Npc1O35604 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Npc1O35604 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Npc1O35604 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC11.11□□□□□ -0.63
Npc1O35604 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Npc1O35604 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Npc1O35604 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Npc1O35604 Gm7964-201ENSMUST00000051522 1378 ntBASIC11.11□□□□□ -0.63
Npc1O35604 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Npc1O35604 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Npc1O35604 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC11.11□□□□□ -0.63
Npc1O35604 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Npc1O35604 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Npc1O35604 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Npc1O35604 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Npc1O35604 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Npc1O35604 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Npc1O35604 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Npc1O35604 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Npc1O35604 Gm44190-201ENSMUST00000205083 1401 ntBASIC11.1□□□□□ -0.63
Npc1O35604 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Npc1O35604 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Npc1O35604 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Npc1O35604 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Npc1O35604 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Npc1O35604 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Npc1O35604 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Npc1O35604 AC122811.1-201ENSMUST00000222257 2921 ntBASIC11.1□□□□□ -0.63
Npc1O35604 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Npc1O35604 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Npc1O35604 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Npc1O35604 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Npc1O35604 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Npc1O35604 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Npc1O35604 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Npc1O35604 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC11.1□□□□□ -0.63
Npc1O35604 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
Npc1O35604 Gm13888-201ENSMUST00000119148 422 ntBASIC11.1□□□□□ -0.63
Npc1O35604 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Npc1O35604 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Npc1O35604 Mir8115-201ENSMUST00000184992 119 ntBASIC11.1□□□□□ -0.63
Npc1O35604 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC11.1□□□□□ -0.63
Npc1O35604 Gm8574-201ENSMUST00000203207 924 ntBASIC11.1□□□□□ -0.63
Npc1O35604 Gm44755-201ENSMUST00000207830 2102 ntBASIC11.1□□□□□ -0.63
Npc1O35604 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Npc1O35604 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Npc1O35604 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.1□□□□□ -0.63
Npc1O35604 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC11.1□□□□□ -0.63
Npc1O35604 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Npc1O35604 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Npc1O35604 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Npc1O35604 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.1□□□□□ -0.63
Npc1O35604 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Npc1O35604 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Npc1O35604 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Npc1O35604 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Npc1O35604 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC11.1□□□□□ -0.63
Npc1O35604 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Npc1O35604 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Npc1O35604 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Npc1O35604 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Npc1O35604 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Npc1O35604 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Npc1O35604 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Npc1O35604 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Npc1O35604 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
Npc1O35604 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Npc1O35604 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Npc1O35604 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Npc1O35604 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Npc1O35604 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Npc1O35604 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.09□□□□□ -0.63
Npc1O35604 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
Npc1O35604 Gm43931-201ENSMUST00000204817 2870 ntBASIC11.09□□□□□ -0.63
Npc1O35604 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Npc1O35604 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC11.09□□□□□ -0.63
Npc1O35604 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Npc1O35604 Gm6560-201ENSMUST00000198588 1591 ntBASIC11.09□□□□□ -0.63
Npc1O35604 Gm23272-201ENSMUST00000104053 129 ntBASIC11.09□□□□□ -0.63
Npc1O35604 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Npc1O35604 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Npc1O35604 Gm16219-201ENSMUST00000120096 274 ntBASIC11.09□□□□□ -0.63
Npc1O35604 Gm12176-201ENSMUST00000121420 875 ntBASIC11.09□□□□□ -0.63
Npc1O35604 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC11.09□□□□□ -0.63
Npc1O35604 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC11.09□□□□□ -0.63
Npc1O35604 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Npc1O35604 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Npc1O35604 Gm22138-201ENSMUST00000158748 128 ntBASIC11.09□□□□□ -0.63
Npc1O35604 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Npc1O35604 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Npc1O35604 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Npc1O35604 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Npc1O35604 Mir7076-201ENSMUST00000183519 74 ntBASIC11.09□□□□□ -0.63
Npc1O35604 Gm27910-201ENSMUST00000185004 107 ntBASIC11.09□□□□□ -0.63
Npc1O35604 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC11.09□□□□□ -0.63
Npc1O35604 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC11.09□□□□□ -0.63
Npc1O35604 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms