Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Gm6337-203ENSMUST00000177662 618 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Ccdc188F6WEU2 Gm3727-202ENSMUST00000178251 618 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Ccdc188F6WEU2 1700113A16Rik-203ENSMUST00000200006 563 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ccdc188F6WEU2 Gm43122-202ENSMUST00000202259 526 ntTSL 2 BASIC11.45□□□□□ -0.58
Ccdc188F6WEU2 Zfp787-203ENSMUST00000207331 376 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ccdc188F6WEU2 Gm39147-202ENSMUST00000211730 882 ntTSL 5 BASIC11.45□□□□□ -0.58
Ccdc188F6WEU2 4930458K08Rik-201ENSMUST00000219952 1264 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ccdc188F6WEU2 Taar1-201ENSMUST00000051532 1114 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Ccdc188F6WEU2 Dcpp2-201ENSMUST00000088598 611 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccdc188F6WEU2 Supt4a-201ENSMUST00000093955 706 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccdc188F6WEU2 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC11.45□□□□□ -0.58
Ccdc188F6WEU2 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
Ccdc188F6WEU2 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccdc188F6WEU2 Gm9244-201ENSMUST00000056767 2129 ntBASIC11.45□□□□□ -0.58
Ccdc188F6WEU2 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccdc188F6WEU2 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccdc188F6WEU2 Grk6-205ENSMUST00000224653 2976 ntBASIC11.45□□□□□ -0.58
Ccdc188F6WEU2 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ccdc188F6WEU2 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Ccdc188F6WEU2 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccdc188F6WEU2 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Ccdc188F6WEU2 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Ccdc188F6WEU2 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Ccdc188F6WEU2 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.45□□□□□ -0.58
Ccdc188F6WEU2 Gpr19-213ENSMUST00000215088 1484 ntTSL 5 BASIC11.44□□□□□ -0.58
Ccdc188F6WEU2 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC11.44□□□□□ -0.58
Ccdc188F6WEU2 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc188F6WEU2 Slc10a4-202ENSMUST00000201304 1419 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc188F6WEU2 Gm44190-201ENSMUST00000205083 1401 ntBASIC11.44□□□□□ -0.58
Ccdc188F6WEU2 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
Ccdc188F6WEU2 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc188F6WEU2 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc188F6WEU2 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc188F6WEU2 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.44□□□□□ -0.58
Ccdc188F6WEU2 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Ccdc188F6WEU2 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc188F6WEU2 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Ccdc188F6WEU2 Gm14571-201ENSMUST00000118292 570 ntBASIC11.44□□□□□ -0.58
Ccdc188F6WEU2 Epp13-201ENSMUST00000121024 957 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Ccdc188F6WEU2 Actg2-202ENSMUST00000121731 1273 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Ccdc188F6WEU2 Gm44805-201ENSMUST00000127648 765 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Ccdc188F6WEU2 Zfp961-204ENSMUST00000136516 601 ntTSL 2 BASIC11.44□□□□□ -0.58
Ccdc188F6WEU2 Gm28845-201ENSMUST00000144760 733 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Ccdc188F6WEU2 Gm16013-201ENSMUST00000152249 353 ntTSL 3 BASIC11.44□□□□□ -0.58
Ccdc188F6WEU2 Gm16165-201ENSMUST00000160140 795 ntBASIC11.44□□□□□ -0.58
Ccdc188F6WEU2 Gm25735-201ENSMUST00000175164 215 ntBASIC11.44□□□□□ -0.58
Ccdc188F6WEU2 Fam47e-205ENSMUST00000175974 1016 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc188F6WEU2 Gm20629-201ENSMUST00000176157 513 ntTSL 3 BASIC11.44□□□□□ -0.58
Ccdc188F6WEU2 Gm27833-201ENSMUST00000184285 124 ntBASIC11.44□□□□□ -0.58
Ccdc188F6WEU2 Mir8104-201ENSMUST00000185165 101 ntBASIC11.44□□□□□ -0.58
Ccdc188F6WEU2 Gm29651-201ENSMUST00000189088 697 ntBASIC11.44□□□□□ -0.58
Ccdc188F6WEU2 Gm43450-201ENSMUST00000202611 632 ntTSL 3 BASIC11.44□□□□□ -0.58
Ccdc188F6WEU2 Gm5311-201ENSMUST00000203518 709 ntBASIC11.44□□□□□ -0.58
Ccdc188F6WEU2 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Ccdc188F6WEU2 Gm45225-201ENSMUST00000206852 1139 ntBASIC11.44□□□□□ -0.58
Ccdc188F6WEU2 Gm31135-202ENSMUST00000208946 1155 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc188F6WEU2 Zfp389-202ENSMUST00000224437 1234 ntBASIC11.44□□□□□ -0.58
Ccdc188F6WEU2 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc188F6WEU2 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc188F6WEU2 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc188F6WEU2 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC11.44□□□□□ -0.58
Ccdc188F6WEU2 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Ccdc188F6WEU2 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc188F6WEU2 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc188F6WEU2 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc188F6WEU2 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc188F6WEU2 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc188F6WEU2 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc188F6WEU2 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc188F6WEU2 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc188F6WEU2 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc188F6WEU2 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc188F6WEU2 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Ccdc188F6WEU2 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc188F6WEU2 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc188F6WEU2 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc188F6WEU2 Ppid-201ENSMUST00000029382 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc188F6WEU2 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc188F6WEU2 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc188F6WEU2 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc188F6WEU2 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc188F6WEU2 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.43□□□□□ -0.58
Ccdc188F6WEU2 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC11.43□□□□□ -0.58
Ccdc188F6WEU2 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC11.43□□□□□ -0.58
Ccdc188F6WEU2 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc188F6WEU2 Gm37160-201ENSMUST00000193081 1689 ntBASIC11.43□□□□□ -0.58
Ccdc188F6WEU2 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Ccdc188F6WEU2 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc188F6WEU2 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Ccdc188F6WEU2 9530059O14Rik-204ENSMUST00000215759 1606 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc188F6WEU2 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc188F6WEU2 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc188F6WEU2 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc188F6WEU2 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc188F6WEU2 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc188F6WEU2 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc188F6WEU2 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Ccdc188F6WEU2 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc188F6WEU2 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC11.43□□□□□ -0.58
Ccdc188F6WEU2 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms