Protein–RNA interactions for Protein: D3Z3K2

Ccnb1ip1, E3 ubiquitin-protein ligase CCNB1IP1, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccnb1ip1D3Z3K2 Gm7029-201ENSMUST00000173226 450 ntBASIC10.19□□□□□ -0.78
Ccnb1ip1D3Z3K2 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Ccnb1ip1D3Z3K2 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC10.19□□□□□ -0.78
Ccnb1ip1D3Z3K2 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC10.19□□□□□ -0.78
Ccnb1ip1D3Z3K2 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC10.19□□□□□ -0.78
Ccnb1ip1D3Z3K2 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Ccnb1ip1D3Z3K2 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC10.19□□□□□ -0.78
Ccnb1ip1D3Z3K2 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Ccnb1ip1D3Z3K2 Gm38321-201ENSMUST00000195053 235 ntBASIC10.19□□□□□ -0.78
Ccnb1ip1D3Z3K2 Gm2213-201ENSMUST00000197485 688 ntBASIC10.19□□□□□ -0.78
Ccnb1ip1D3Z3K2 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Ccnb1ip1D3Z3K2 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Ccnb1ip1D3Z3K2 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ccnb1ip1D3Z3K2 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC10.19□□□□□ -0.78
Ccnb1ip1D3Z3K2 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ccnb1ip1D3Z3K2 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ccnb1ip1D3Z3K2 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ccnb1ip1D3Z3K2 Elf5-206ENSMUST00000164172 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ccnb1ip1D3Z3K2 Nampt-201ENSMUST00000020886 4527 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ccnb1ip1D3Z3K2 Cxcr2-201ENSMUST00000027372 2220 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Ccnb1ip1D3Z3K2 Nfrkb-201ENSMUST00000086167 5161 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ccnb1ip1D3Z3K2 Sall2-201ENSMUST00000058326 5147 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ccnb1ip1D3Z3K2 Gpr37-201ENSMUST00000054867 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ccnb1ip1D3Z3K2 Slf2-201ENSMUST00000096053 6880 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ccnb1ip1D3Z3K2 Lipg-201ENSMUST00000066532 3787 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ccnb1ip1D3Z3K2 Shroom2-202ENSMUST00000101141 7494 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ccnb1ip1D3Z3K2 Lrrc49-204ENSMUST00000114034 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ccnb1ip1D3Z3K2 Gm32219-201ENSMUST00000221234 1819 ntTSL 5 BASIC10.19□□□□□ -0.78
Ccnb1ip1D3Z3K2 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ccnb1ip1D3Z3K2 Gm8036-201ENSMUST00000118089 1718 ntBASIC10.19□□□□□ -0.78
Ccnb1ip1D3Z3K2 Ncf2-201ENSMUST00000027754 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ccnb1ip1D3Z3K2 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccnb1ip1D3Z3K2 Gm44888-201ENSMUST00000209119 2541 ntBASIC10.18□□□□□ -0.78
Ccnb1ip1D3Z3K2 Ctnnd1-205ENSMUST00000111670 5047 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Ccnb1ip1D3Z3K2 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC10.18□□□□□ -0.78
Ccnb1ip1D3Z3K2 Abcc3-201ENSMUST00000021231 4999 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccnb1ip1D3Z3K2 Gm43375-201ENSMUST00000196705 2480 ntBASIC10.18□□□□□ -0.78
Ccnb1ip1D3Z3K2 Gm42571-201ENSMUST00000201197 2464 ntBASIC10.18□□□□□ -0.78
Ccnb1ip1D3Z3K2 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Ccnb1ip1D3Z3K2 Zfp873-203ENSMUST00000209622 2284 ntTSL 2 BASIC10.18□□□□□ -0.78
Ccnb1ip1D3Z3K2 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC10.18□□□□□ -0.78
Ccnb1ip1D3Z3K2 Lrrc61-202ENSMUST00000114545 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccnb1ip1D3Z3K2 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Ccnb1ip1D3Z3K2 Slc19a1-208ENSMUST00000136925 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccnb1ip1D3Z3K2 Gm18626-201ENSMUST00000221512 1409 ntBASIC10.18□□□□□ -0.78
Ccnb1ip1D3Z3K2 Ncoa2-201ENSMUST00000006037 4897 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccnb1ip1D3Z3K2 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Ccnb1ip1D3Z3K2 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccnb1ip1D3Z3K2 Megf10-201ENSMUST00000075770 7514 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccnb1ip1D3Z3K2 Ctc1-202ENSMUST00000116359 3978 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccnb1ip1D3Z3K2 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC10.18□□□□□ -0.78
Ccnb1ip1D3Z3K2 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccnb1ip1D3Z3K2 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC10.18□□□□□ -0.78
Ccnb1ip1D3Z3K2 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccnb1ip1D3Z3K2 Exoc4-202ENSMUST00000090381 2598 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Ccnb1ip1D3Z3K2 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Ccnb1ip1D3Z3K2 Gm6981-201ENSMUST00000182467 1008 ntBASIC10.18□□□□□ -0.78
Ccnb1ip1D3Z3K2 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC10.18□□□□□ -0.78
Ccnb1ip1D3Z3K2 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Ccnb1ip1D3Z3K2 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Ccnb1ip1D3Z3K2 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC10.18□□□□□ -0.78
Ccnb1ip1D3Z3K2 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC10.18□□□□□ -0.78
Ccnb1ip1D3Z3K2 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC10.18□□□□□ -0.78
Ccnb1ip1D3Z3K2 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC10.18□□□□□ -0.78
Ccnb1ip1D3Z3K2 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccnb1ip1D3Z3K2 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Ccnb1ip1D3Z3K2 Nrbp2-201ENSMUST00000019516 2495 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Ccnb1ip1D3Z3K2 Pld1-201ENSMUST00000067757 4804 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccnb1ip1D3Z3K2 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC10.18□□□□□ -0.78
Ccnb1ip1D3Z3K2 Slc16a7-202ENSMUST00000105257 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccnb1ip1D3Z3K2 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC10.18□□□□□ -0.78
Ccnb1ip1D3Z3K2 Rbp1-201ENSMUST00000052068 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccnb1ip1D3Z3K2 Zfp605-202ENSMUST00000112528 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccnb1ip1D3Z3K2 Gm8131-201ENSMUST00000213783 1570 ntBASIC10.18□□□□□ -0.78
Ccnb1ip1D3Z3K2 Oas3-201ENSMUST00000044833 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccnb1ip1D3Z3K2 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccnb1ip1D3Z3K2 BC035947-201ENSMUST00000170511 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ccnb1ip1D3Z3K2 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Ccnb1ip1D3Z3K2 Spata16-201ENSMUST00000047005 2022 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccnb1ip1D3Z3K2 Commd1-204ENSMUST00000159081 4508 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccnb1ip1D3Z3K2 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Ccnb1ip1D3Z3K2 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccnb1ip1D3Z3K2 Exoc3l4-210ENSMUST00000223050 3418 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccnb1ip1D3Z3K2 Man2c1-211ENSMUST00000160147 3820 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccnb1ip1D3Z3K2 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Ccnb1ip1D3Z3K2 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccnb1ip1D3Z3K2 N4bp2l1-205ENSMUST00000202031 1864 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Ccnb1ip1D3Z3K2 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC10.17□□□□□ -0.78
Ccnb1ip1D3Z3K2 Cdh1-203ENSMUST00000167688 3203 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Ccnb1ip1D3Z3K2 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccnb1ip1D3Z3K2 Abcg1-201ENSMUST00000024829 3610 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccnb1ip1D3Z3K2 Elf4-201ENSMUST00000033429 5847 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Ccnb1ip1D3Z3K2 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Ccnb1ip1D3Z3K2 Ncor2-201ENSMUST00000055256 7780 ntAPPRIS ALT2 TSL 2 BASIC10.17□□□□□ -0.78
Ccnb1ip1D3Z3K2 Ap1m2-201ENSMUST00000003397 1706 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccnb1ip1D3Z3K2 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
Ccnb1ip1D3Z3K2 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
Ccnb1ip1D3Z3K2 Gm12151-201ENSMUST00000121374 290 ntBASIC10.17□□□□□ -0.78
Ccnb1ip1D3Z3K2 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Ccnb1ip1D3Z3K2 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC10.17□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms