Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cx3cr1Q9Z0D9 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cx3cr1Q9Z0D9 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC17.2■□□□□ 0.34
Cx3cr1Q9Z0D9 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Cx3cr1Q9Z0D9 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cx3cr1Q9Z0D9 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cx3cr1Q9Z0D9 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cx3cr1Q9Z0D9 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC17.19■□□□□ 0.34
Cx3cr1Q9Z0D9 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cx3cr1Q9Z0D9 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cx3cr1Q9Z0D9 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Cx3cr1Q9Z0D9 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Cx3cr1Q9Z0D9 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cx3cr1Q9Z0D9 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cx3cr1Q9Z0D9 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cx3cr1Q9Z0D9 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cx3cr1Q9Z0D9 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cx3cr1Q9Z0D9 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Cx3cr1Q9Z0D9 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cx3cr1Q9Z0D9 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cx3cr1Q9Z0D9 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cx3cr1Q9Z0D9 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cx3cr1Q9Z0D9 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cx3cr1Q9Z0D9 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cx3cr1Q9Z0D9 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cx3cr1Q9Z0D9 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cx3cr1Q9Z0D9 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cx3cr1Q9Z0D9 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
Cx3cr1Q9Z0D9 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Cx3cr1Q9Z0D9 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cx3cr1Q9Z0D9 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cx3cr1Q9Z0D9 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cx3cr1Q9Z0D9 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Cx3cr1Q9Z0D9 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cx3cr1Q9Z0D9 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cx3cr1Q9Z0D9 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cx3cr1Q9Z0D9 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cx3cr1Q9Z0D9 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cx3cr1Q9Z0D9 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cx3cr1Q9Z0D9 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cx3cr1Q9Z0D9 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Cx3cr1Q9Z0D9 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Cx3cr1Q9Z0D9 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cx3cr1Q9Z0D9 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cx3cr1Q9Z0D9 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cx3cr1Q9Z0D9 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cx3cr1Q9Z0D9 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cx3cr1Q9Z0D9 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.16■□□□□ 0.34
Cx3cr1Q9Z0D9 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cx3cr1Q9Z0D9 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cx3cr1Q9Z0D9 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cx3cr1Q9Z0D9 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Cx3cr1Q9Z0D9 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC17.15■□□□□ 0.34
Cx3cr1Q9Z0D9 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cx3cr1Q9Z0D9 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.15■□□□□ 0.34
Cx3cr1Q9Z0D9 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cx3cr1Q9Z0D9 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.15■□□□□ 0.34
Cx3cr1Q9Z0D9 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cx3cr1Q9Z0D9 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Cx3cr1Q9Z0D9 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cx3cr1Q9Z0D9 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cx3cr1Q9Z0D9 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cx3cr1Q9Z0D9 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cx3cr1Q9Z0D9 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC17.14■□□□□ 0.33
Cx3cr1Q9Z0D9 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Cx3cr1Q9Z0D9 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cx3cr1Q9Z0D9 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Cx3cr1Q9Z0D9 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Cx3cr1Q9Z0D9 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cx3cr1Q9Z0D9 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cx3cr1Q9Z0D9 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cx3cr1Q9Z0D9 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cx3cr1Q9Z0D9 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cx3cr1Q9Z0D9 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cx3cr1Q9Z0D9 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cx3cr1Q9Z0D9 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cx3cr1Q9Z0D9 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC17.13■□□□□ 0.33
Cx3cr1Q9Z0D9 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cx3cr1Q9Z0D9 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cx3cr1Q9Z0D9 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cx3cr1Q9Z0D9 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cx3cr1Q9Z0D9 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cx3cr1Q9Z0D9 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Cx3cr1Q9Z0D9 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cx3cr1Q9Z0D9 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cx3cr1Q9Z0D9 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cx3cr1Q9Z0D9 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cx3cr1Q9Z0D9 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.11■□□□□ 0.33
Cx3cr1Q9Z0D9 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cx3cr1Q9Z0D9 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cx3cr1Q9Z0D9 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cx3cr1Q9Z0D9 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cx3cr1Q9Z0D9 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Cx3cr1Q9Z0D9 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cx3cr1Q9Z0D9 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Cx3cr1Q9Z0D9 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cx3cr1Q9Z0D9 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cx3cr1Q9Z0D9 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cx3cr1Q9Z0D9 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC17.11■□□□□ 0.33
Cx3cr1Q9Z0D9 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms