Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clcn2Q9R0A1 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.74■□□□□ 0.91
Clcn2Q9R0A1 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.74■□□□□ 0.91
Clcn2Q9R0A1 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clcn2Q9R0A1 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clcn2Q9R0A1 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Clcn2Q9R0A1 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Clcn2Q9R0A1 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Clcn2Q9R0A1 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.73■□□□□ 0.91
Clcn2Q9R0A1 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.73■□□□□ 0.91
Clcn2Q9R0A1 Gm45102-201ENSMUST00000207427 857 ntBASIC20.73■□□□□ 0.91
Clcn2Q9R0A1 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Clcn2Q9R0A1 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Clcn2Q9R0A1 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Clcn2Q9R0A1 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Clcn2Q9R0A1 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Clcn2Q9R0A1 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clcn2Q9R0A1 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clcn2Q9R0A1 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clcn2Q9R0A1 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clcn2Q9R0A1 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.72■□□□□ 0.91
Clcn2Q9R0A1 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.72■□□□□ 0.91
Clcn2Q9R0A1 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.72■□□□□ 0.91
Clcn2Q9R0A1 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clcn2Q9R0A1 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clcn2Q9R0A1 Gm9959-201ENSMUST00000068277 390 ntBASIC20.72■□□□□ 0.91
Clcn2Q9R0A1 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Clcn2Q9R0A1 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clcn2Q9R0A1 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Clcn2Q9R0A1 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clcn2Q9R0A1 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Clcn2Q9R0A1 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clcn2Q9R0A1 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Clcn2Q9R0A1 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clcn2Q9R0A1 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Clcn2Q9R0A1 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Clcn2Q9R0A1 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clcn2Q9R0A1 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.71■□□□□ 0.91
Clcn2Q9R0A1 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Clcn2Q9R0A1 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.71■□□□□ 0.91
Clcn2Q9R0A1 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.71■□□□□ 0.91
Clcn2Q9R0A1 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Clcn2Q9R0A1 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clcn2Q9R0A1 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Clcn2Q9R0A1 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Clcn2Q9R0A1 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Clcn2Q9R0A1 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
Clcn2Q9R0A1 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Clcn2Q9R0A1 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Clcn2Q9R0A1 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.7■□□□□ 0.9
Clcn2Q9R0A1 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.7■□□□□ 0.9
Clcn2Q9R0A1 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Clcn2Q9R0A1 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Clcn2Q9R0A1 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Clcn2Q9R0A1 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Clcn2Q9R0A1 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Clcn2Q9R0A1 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Clcn2Q9R0A1 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Clcn2Q9R0A1 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Clcn2Q9R0A1 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Clcn2Q9R0A1 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Clcn2Q9R0A1 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Clcn2Q9R0A1 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Clcn2Q9R0A1 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.69■□□□□ 0.9
Clcn2Q9R0A1 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.69■□□□□ 0.9
Clcn2Q9R0A1 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Clcn2Q9R0A1 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clcn2Q9R0A1 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Clcn2Q9R0A1 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Clcn2Q9R0A1 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.68■□□□□ 0.9
Clcn2Q9R0A1 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clcn2Q9R0A1 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clcn2Q9R0A1 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clcn2Q9R0A1 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clcn2Q9R0A1 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.67■□□□□ 0.9
Clcn2Q9R0A1 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Clcn2Q9R0A1 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clcn2Q9R0A1 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clcn2Q9R0A1 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clcn2Q9R0A1 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clcn2Q9R0A1 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
Clcn2Q9R0A1 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clcn2Q9R0A1 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clcn2Q9R0A1 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.66■□□□□ 0.9
Clcn2Q9R0A1 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.66■□□□□ 0.9
Clcn2Q9R0A1 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clcn2Q9R0A1 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clcn2Q9R0A1 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Clcn2Q9R0A1 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clcn2Q9R0A1 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clcn2Q9R0A1 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Clcn2Q9R0A1 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Clcn2Q9R0A1 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Clcn2Q9R0A1 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Clcn2Q9R0A1 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Clcn2Q9R0A1 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Clcn2Q9R0A1 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Clcn2Q9R0A1 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.65■□□□□ 0.9
Clcn2Q9R0A1 Rps24-207ENSMUST00000224568 714 ntBASIC20.65■□□□□ 0.9
Clcn2Q9R0A1 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms