Protein–RNA interactions for Protein: Q9JM58

Crlf1, Cytokine receptor-like factor 1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf1Q9JM58 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Crlf1Q9JM58 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Crlf1Q9JM58 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Crlf1Q9JM58 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Crlf1Q9JM58 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC16.43■□□□□ 0.22
Crlf1Q9JM58 Gm10252-201ENSMUST00000209541 832 ntBASIC16.43■□□□□ 0.22
Crlf1Q9JM58 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.43■□□□□ 0.22
Crlf1Q9JM58 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Crlf1Q9JM58 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
Crlf1Q9JM58 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.43■□□□□ 0.22
Crlf1Q9JM58 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC16.42■□□□□ 0.22
Crlf1Q9JM58 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC16.42■□□□□ 0.22
Crlf1Q9JM58 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Crlf1Q9JM58 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Crlf1Q9JM58 Gm9988-201ENSMUST00000069786 435 ntBASIC16.42■□□□□ 0.22
Crlf1Q9JM58 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Crlf1Q9JM58 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Crlf1Q9JM58 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Crlf1Q9JM58 Gm20760-201ENSMUST00000179197 648 ntBASIC16.41■□□□□ 0.22
Crlf1Q9JM58 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Crlf1Q9JM58 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Crlf1Q9JM58 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC16.41■□□□□ 0.22
Crlf1Q9JM58 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
Crlf1Q9JM58 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Crlf1Q9JM58 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC16.4■□□□□ 0.22
Crlf1Q9JM58 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Crlf1Q9JM58 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Crlf1Q9JM58 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.4■□□□□ 0.22
Crlf1Q9JM58 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC16.4■□□□□ 0.22
Crlf1Q9JM58 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Crlf1Q9JM58 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Crlf1Q9JM58 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Crlf1Q9JM58 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
Crlf1Q9JM58 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC16.4■□□□□ 0.22
Crlf1Q9JM58 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC16.4■□□□□ 0.22
Crlf1Q9JM58 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Crlf1Q9JM58 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Crlf1Q9JM58 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Crlf1Q9JM58 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC16.39■□□□□ 0.21
Crlf1Q9JM58 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Crlf1Q9JM58 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Crlf1Q9JM58 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC16.39■□□□□ 0.21
Crlf1Q9JM58 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC16.39■□□□□ 0.21
Crlf1Q9JM58 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
Crlf1Q9JM58 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Crlf1Q9JM58 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Crlf1Q9JM58 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Crlf1Q9JM58 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Crlf1Q9JM58 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Crlf1Q9JM58 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Crlf1Q9JM58 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Crlf1Q9JM58 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Crlf1Q9JM58 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Crlf1Q9JM58 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Crlf1Q9JM58 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Crlf1Q9JM58 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Crlf1Q9JM58 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Crlf1Q9JM58 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.38■□□□□ 0.21
Crlf1Q9JM58 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC16.38■□□□□ 0.21
Crlf1Q9JM58 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Crlf1Q9JM58 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Crlf1Q9JM58 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC16.38■□□□□ 0.21
Crlf1Q9JM58 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Crlf1Q9JM58 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Crlf1Q9JM58 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Crlf1Q9JM58 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Crlf1Q9JM58 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Crlf1Q9JM58 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Crlf1Q9JM58 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Crlf1Q9JM58 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Crlf1Q9JM58 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Crlf1Q9JM58 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Crlf1Q9JM58 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Crlf1Q9JM58 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Crlf1Q9JM58 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
Crlf1Q9JM58 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Crlf1Q9JM58 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
Crlf1Q9JM58 Gm8520-201ENSMUST00000186517 868 ntBASIC16.36■□□□□ 0.21
Crlf1Q9JM58 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC16.36■□□□□ 0.21
Crlf1Q9JM58 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Crlf1Q9JM58 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC16.36■□□□□ 0.21
Crlf1Q9JM58 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Crlf1Q9JM58 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Crlf1Q9JM58 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC16.35■□□□□ 0.21
Crlf1Q9JM58 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Crlf1Q9JM58 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Crlf1Q9JM58 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Crlf1Q9JM58 Gm13234-201ENSMUST00000120010 747 ntBASIC16.35■□□□□ 0.21
Crlf1Q9JM58 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Crlf1Q9JM58 Mir7071-201ENSMUST00000184847 69 ntBASIC16.35■□□□□ 0.21
Crlf1Q9JM58 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC16.35■□□□□ 0.21
Crlf1Q9JM58 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Crlf1Q9JM58 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC16.35■□□□□ 0.21
Crlf1Q9JM58 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Crlf1Q9JM58 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Crlf1Q9JM58 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Crlf1Q9JM58 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Crlf1Q9JM58 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Crlf1Q9JM58 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Crlf1Q9JM58 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms