Protein–RNA interactions for Protein: Q9D995

Cntd1, Cyclin N-terminal domain-containing protein 1, mousemouse

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntd1Q9D995 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Cntd1Q9D995 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cntd1Q9D995 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Cntd1Q9D995 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.27■□□□□ 0.68
Cntd1Q9D995 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.27■□□□□ 0.67
Cntd1Q9D995 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cntd1Q9D995 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Cntd1Q9D995 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cntd1Q9D995 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cntd1Q9D995 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.26■□□□□ 0.67
Cntd1Q9D995 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cntd1Q9D995 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Cntd1Q9D995 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.26■□□□□ 0.67
Cntd1Q9D995 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cntd1Q9D995 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.25■□□□□ 0.67
Cntd1Q9D995 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cntd1Q9D995 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.25■□□□□ 0.67
Cntd1Q9D995 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cntd1Q9D995 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cntd1Q9D995 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.25■□□□□ 0.67
Cntd1Q9D995 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cntd1Q9D995 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cntd1Q9D995 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.25■□□□□ 0.67
Cntd1Q9D995 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cntd1Q9D995 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cntd1Q9D995 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cntd1Q9D995 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cntd1Q9D995 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cntd1Q9D995 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cntd1Q9D995 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cntd1Q9D995 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cntd1Q9D995 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cntd1Q9D995 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cntd1Q9D995 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cntd1Q9D995 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cntd1Q9D995 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cntd1Q9D995 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cntd1Q9D995 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cntd1Q9D995 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cntd1Q9D995 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Cntd1Q9D995 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Cntd1Q9D995 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cntd1Q9D995 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.23■□□□□ 0.67
Cntd1Q9D995 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cntd1Q9D995 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.23■□□□□ 0.67
Cntd1Q9D995 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cntd1Q9D995 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.23■□□□□ 0.67
Cntd1Q9D995 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cntd1Q9D995 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
Cntd1Q9D995 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cntd1Q9D995 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Cntd1Q9D995 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cntd1Q9D995 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cntd1Q9D995 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cntd1Q9D995 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cntd1Q9D995 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cntd1Q9D995 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cntd1Q9D995 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
Cntd1Q9D995 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cntd1Q9D995 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cntd1Q9D995 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cntd1Q9D995 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cntd1Q9D995 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cntd1Q9D995 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cntd1Q9D995 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
Cntd1Q9D995 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cntd1Q9D995 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cntd1Q9D995 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.21■□□□□ 0.67
Cntd1Q9D995 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Cntd1Q9D995 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cntd1Q9D995 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cntd1Q9D995 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cntd1Q9D995 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cntd1Q9D995 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Cntd1Q9D995 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cntd1Q9D995 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.2■□□□□ 0.66
Cntd1Q9D995 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cntd1Q9D995 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.2■□□□□ 0.66
Cntd1Q9D995 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cntd1Q9D995 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cntd1Q9D995 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Cntd1Q9D995 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.2■□□□□ 0.66
Cntd1Q9D995 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cntd1Q9D995 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cntd1Q9D995 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cntd1Q9D995 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cntd1Q9D995 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.19■□□□□ 0.66
Cntd1Q9D995 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.19■□□□□ 0.66
Cntd1Q9D995 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Cntd1Q9D995 Cap2-205ENSMUST00000225824 1634 ntBASIC19.19■□□□□ 0.66
Cntd1Q9D995 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cntd1Q9D995 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.19■□□□□ 0.66
Cntd1Q9D995 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cntd1Q9D995 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cntd1Q9D995 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cntd1Q9D995 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cntd1Q9D995 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cntd1Q9D995 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cntd1Q9D995 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cntd1Q9D995 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms