Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp1aQ921W0 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp1aQ921W0 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp1aQ921W0 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp1aQ921W0 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Chmp1aQ921W0 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp1aQ921W0 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp1aQ921W0 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp1aQ921W0 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp1aQ921W0 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp1aQ921W0 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp1aQ921W0 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp1aQ921W0 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp1aQ921W0 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Chmp1aQ921W0 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp1aQ921W0 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Chmp1aQ921W0 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.85■□□□□ 0.45
Chmp1aQ921W0 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp1aQ921W0 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp1aQ921W0 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp1aQ921W0 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC17.85■□□□□ 0.45
Chmp1aQ921W0 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp1aQ921W0 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp1aQ921W0 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp1aQ921W0 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp1aQ921W0 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Chmp1aQ921W0 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Chmp1aQ921W0 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp1aQ921W0 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp1aQ921W0 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chmp1aQ921W0 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chmp1aQ921W0 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Chmp1aQ921W0 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Chmp1aQ921W0 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.84■□□□□ 0.45
Chmp1aQ921W0 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chmp1aQ921W0 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Chmp1aQ921W0 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Chmp1aQ921W0 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Chmp1aQ921W0 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Chmp1aQ921W0 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Chmp1aQ921W0 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.83■□□□□ 0.45
Chmp1aQ921W0 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Chmp1aQ921W0 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Chmp1aQ921W0 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chmp1aQ921W0 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chmp1aQ921W0 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chmp1aQ921W0 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Chmp1aQ921W0 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Chmp1aQ921W0 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chmp1aQ921W0 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chmp1aQ921W0 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Chmp1aQ921W0 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chmp1aQ921W0 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chmp1aQ921W0 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp1aQ921W0 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC17.82■□□□□ 0.44
Chmp1aQ921W0 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp1aQ921W0 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp1aQ921W0 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp1aQ921W0 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp1aQ921W0 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Chmp1aQ921W0 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Chmp1aQ921W0 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp1aQ921W0 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp1aQ921W0 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.82■□□□□ 0.44
Chmp1aQ921W0 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Chmp1aQ921W0 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp1aQ921W0 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp1aQ921W0 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp1aQ921W0 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Chmp1aQ921W0 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC17.81■□□□□ 0.44
Chmp1aQ921W0 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC17.81■□□□□ 0.44
Chmp1aQ921W0 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp1aQ921W0 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp1aQ921W0 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp1aQ921W0 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp1aQ921W0 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp1aQ921W0 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp1aQ921W0 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp1aQ921W0 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Chmp1aQ921W0 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp1aQ921W0 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp1aQ921W0 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp1aQ921W0 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp1aQ921W0 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp1aQ921W0 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp1aQ921W0 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp1aQ921W0 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC17.8■□□□□ 0.44
Chmp1aQ921W0 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp1aQ921W0 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp1aQ921W0 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp1aQ921W0 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Chmp1aQ921W0 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC17.8■□□□□ 0.44
Chmp1aQ921W0 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp1aQ921W0 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp1aQ921W0 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp1aQ921W0 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp1aQ921W0 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.79■□□□□ 0.44
Chmp1aQ921W0 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp1aQ921W0 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp1aQ921W0 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms