Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Sh3kbp1Q8R550 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sh3kbp1Q8R550 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sh3kbp1Q8R550 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sh3kbp1Q8R550 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.9■□□□□ 0.94
Sh3kbp1Q8R550 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sh3kbp1Q8R550 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Sh3kbp1Q8R550 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.9■□□□□ 0.94
Sh3kbp1Q8R550 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sh3kbp1Q8R550 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Sh3kbp1Q8R550 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sh3kbp1Q8R550 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sh3kbp1Q8R550 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Sh3kbp1Q8R550 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Sh3kbp1Q8R550 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sh3kbp1Q8R550 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Sh3kbp1Q8R550 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sh3kbp1Q8R550 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sh3kbp1Q8R550 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Sh3kbp1Q8R550 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sh3kbp1Q8R550 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sh3kbp1Q8R550 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sh3kbp1Q8R550 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sh3kbp1Q8R550 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Sh3kbp1Q8R550 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sh3kbp1Q8R550 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Sh3kbp1Q8R550 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.88■□□□□ 0.93
Sh3kbp1Q8R550 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sh3kbp1Q8R550 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Sh3kbp1Q8R550 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Sh3kbp1Q8R550 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sh3kbp1Q8R550 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Sh3kbp1Q8R550 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Sh3kbp1Q8R550 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sh3kbp1Q8R550 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sh3kbp1Q8R550 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sh3kbp1Q8R550 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
Sh3kbp1Q8R550 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sh3kbp1Q8R550 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.87■□□□□ 0.93
Sh3kbp1Q8R550 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Sh3kbp1Q8R550 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.87■□□□□ 0.93
Sh3kbp1Q8R550 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sh3kbp1Q8R550 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.87■□□□□ 0.93
Sh3kbp1Q8R550 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sh3kbp1Q8R550 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Sh3kbp1Q8R550 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.86■□□□□ 0.93
Sh3kbp1Q8R550 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sh3kbp1Q8R550 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sh3kbp1Q8R550 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Sh3kbp1Q8R550 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sh3kbp1Q8R550 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Sh3kbp1Q8R550 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.86■□□□□ 0.93
Sh3kbp1Q8R550 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sh3kbp1Q8R550 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sh3kbp1Q8R550 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sh3kbp1Q8R550 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sh3kbp1Q8R550 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sh3kbp1Q8R550 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.86■□□□□ 0.93
Sh3kbp1Q8R550 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sh3kbp1Q8R550 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sh3kbp1Q8R550 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.85■□□□□ 0.93
Sh3kbp1Q8R550 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.85■□□□□ 0.93
Sh3kbp1Q8R550 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Sh3kbp1Q8R550 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Sh3kbp1Q8R550 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sh3kbp1Q8R550 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sh3kbp1Q8R550 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sh3kbp1Q8R550 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Sh3kbp1Q8R550 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sh3kbp1Q8R550 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Sh3kbp1Q8R550 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sh3kbp1Q8R550 Gm9870-201ENSMUST00000063874 645 ntBASIC20.84■□□□□ 0.93
Sh3kbp1Q8R550 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Sh3kbp1Q8R550 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.84■□□□□ 0.93
Sh3kbp1Q8R550 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sh3kbp1Q8R550 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.84■□□□□ 0.93
Sh3kbp1Q8R550 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.84■□□□□ 0.93
Sh3kbp1Q8R550 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sh3kbp1Q8R550 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Sh3kbp1Q8R550 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sh3kbp1Q8R550 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.83■□□□□ 0.93
Sh3kbp1Q8R550 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sh3kbp1Q8R550 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sh3kbp1Q8R550 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.92
Sh3kbp1Q8R550 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Sh3kbp1Q8R550 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Sh3kbp1Q8R550 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sh3kbp1Q8R550 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.82■□□□□ 0.92
Sh3kbp1Q8R550 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.82■□□□□ 0.92
Sh3kbp1Q8R550 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sh3kbp1Q8R550 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Sh3kbp1Q8R550 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sh3kbp1Q8R550 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sh3kbp1Q8R550 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.82■□□□□ 0.92
Sh3kbp1Q8R550 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sh3kbp1Q8R550 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sh3kbp1Q8R550 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sh3kbp1Q8R550 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sh3kbp1Q8R550 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sh3kbp1Q8R550 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms