Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nudcd3Q8R1N4 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Nudcd3Q8R1N4 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Nudcd3Q8R1N4 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.29■□□□□ 0.84
Nudcd3Q8R1N4 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nudcd3Q8R1N4 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nudcd3Q8R1N4 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Nudcd3Q8R1N4 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.29■□□□□ 0.84
Nudcd3Q8R1N4 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nudcd3Q8R1N4 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nudcd3Q8R1N4 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Nudcd3Q8R1N4 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nudcd3Q8R1N4 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nudcd3Q8R1N4 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.28■□□□□ 0.84
Nudcd3Q8R1N4 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.28■□□□□ 0.84
Nudcd3Q8R1N4 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.27■□□□□ 0.84
Nudcd3Q8R1N4 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nudcd3Q8R1N4 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nudcd3Q8R1N4 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Nudcd3Q8R1N4 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nudcd3Q8R1N4 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Nudcd3Q8R1N4 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.27■□□□□ 0.84
Nudcd3Q8R1N4 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nudcd3Q8R1N4 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Nudcd3Q8R1N4 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nudcd3Q8R1N4 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Nudcd3Q8R1N4 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Nudcd3Q8R1N4 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Nudcd3Q8R1N4 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Nudcd3Q8R1N4 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nudcd3Q8R1N4 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nudcd3Q8R1N4 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nudcd3Q8R1N4 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.26■□□□□ 0.83
Nudcd3Q8R1N4 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Nudcd3Q8R1N4 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nudcd3Q8R1N4 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nudcd3Q8R1N4 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nudcd3Q8R1N4 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nudcd3Q8R1N4 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nudcd3Q8R1N4 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nudcd3Q8R1N4 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Nudcd3Q8R1N4 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nudcd3Q8R1N4 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Nudcd3Q8R1N4 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nudcd3Q8R1N4 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nudcd3Q8R1N4 Gm7332-201ENSMUST00000118351 454 ntBASIC20.24■□□□□ 0.83
Nudcd3Q8R1N4 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.24■□□□□ 0.83
Nudcd3Q8R1N4 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nudcd3Q8R1N4 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nudcd3Q8R1N4 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.24■□□□□ 0.83
Nudcd3Q8R1N4 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Nudcd3Q8R1N4 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nudcd3Q8R1N4 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nudcd3Q8R1N4 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nudcd3Q8R1N4 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nudcd3Q8R1N4 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.23■□□□□ 0.83
Nudcd3Q8R1N4 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Nudcd3Q8R1N4 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
Nudcd3Q8R1N4 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nudcd3Q8R1N4 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nudcd3Q8R1N4 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nudcd3Q8R1N4 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nudcd3Q8R1N4 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Nudcd3Q8R1N4 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Nudcd3Q8R1N4 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nudcd3Q8R1N4 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Nudcd3Q8R1N4 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.22■□□□□ 0.83
Nudcd3Q8R1N4 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nudcd3Q8R1N4 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Nudcd3Q8R1N4 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nudcd3Q8R1N4 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nudcd3Q8R1N4 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nudcd3Q8R1N4 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nudcd3Q8R1N4 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nudcd3Q8R1N4 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nudcd3Q8R1N4 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nudcd3Q8R1N4 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nudcd3Q8R1N4 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nudcd3Q8R1N4 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Nudcd3Q8R1N4 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nudcd3Q8R1N4 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Nudcd3Q8R1N4 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nudcd3Q8R1N4 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nudcd3Q8R1N4 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.21■□□□□ 0.83
Nudcd3Q8R1N4 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Nudcd3Q8R1N4 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.2■□□□□ 0.82
Nudcd3Q8R1N4 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nudcd3Q8R1N4 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nudcd3Q8R1N4 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Nudcd3Q8R1N4 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Nudcd3Q8R1N4 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Nudcd3Q8R1N4 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nudcd3Q8R1N4 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Nudcd3Q8R1N4 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nudcd3Q8R1N4 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Nudcd3Q8R1N4 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.19■□□□□ 0.82
Nudcd3Q8R1N4 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nudcd3Q8R1N4 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
Nudcd3Q8R1N4 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nudcd3Q8R1N4 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms