Protein–RNA interactions for Protein: Q8BX13

Ube3d, E3 ubiquitin-protein ligase E3D, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3dQ8BX13 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ube3dQ8BX13 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ube3dQ8BX13 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ube3dQ8BX13 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ube3dQ8BX13 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Ube3dQ8BX13 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Ube3dQ8BX13 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC17.98■□□□□ 0.47
Ube3dQ8BX13 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ube3dQ8BX13 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Ube3dQ8BX13 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Ube3dQ8BX13 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ube3dQ8BX13 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.97■□□□□ 0.47
Ube3dQ8BX13 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ube3dQ8BX13 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Ube3dQ8BX13 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Ube3dQ8BX13 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC17.97■□□□□ 0.47
Ube3dQ8BX13 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ube3dQ8BX13 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ube3dQ8BX13 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ube3dQ8BX13 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ube3dQ8BX13 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Ube3dQ8BX13 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.97■□□□□ 0.47
Ube3dQ8BX13 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ube3dQ8BX13 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ube3dQ8BX13 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ube3dQ8BX13 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ube3dQ8BX13 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ube3dQ8BX13 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ube3dQ8BX13 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ube3dQ8BX13 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Ube3dQ8BX13 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ube3dQ8BX13 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ube3dQ8BX13 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ube3dQ8BX13 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ube3dQ8BX13 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ube3dQ8BX13 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ube3dQ8BX13 Gm15039-201ENSMUST00000118914 875 ntBASIC17.95■□□□□ 0.46
Ube3dQ8BX13 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ube3dQ8BX13 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Ube3dQ8BX13 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ube3dQ8BX13 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ube3dQ8BX13 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ube3dQ8BX13 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ube3dQ8BX13 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Ube3dQ8BX13 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Ube3dQ8BX13 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ube3dQ8BX13 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC17.94■□□□□ 0.46
Ube3dQ8BX13 AC158990.1-201ENSMUST00000221450 2016 ntBASIC17.94■□□□□ 0.46
Ube3dQ8BX13 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ube3dQ8BX13 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.94■□□□□ 0.46
Ube3dQ8BX13 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ube3dQ8BX13 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ube3dQ8BX13 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ube3dQ8BX13 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ube3dQ8BX13 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ube3dQ8BX13 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC17.93■□□□□ 0.46
Ube3dQ8BX13 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ube3dQ8BX13 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ube3dQ8BX13 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ube3dQ8BX13 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC17.93■□□□□ 0.46
Ube3dQ8BX13 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ube3dQ8BX13 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Ube3dQ8BX13 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ube3dQ8BX13 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ube3dQ8BX13 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ube3dQ8BX13 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.92■□□□□ 0.46
Ube3dQ8BX13 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ube3dQ8BX13 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ube3dQ8BX13 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ube3dQ8BX13 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ube3dQ8BX13 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ube3dQ8BX13 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ube3dQ8BX13 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
Ube3dQ8BX13 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ube3dQ8BX13 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Ube3dQ8BX13 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ube3dQ8BX13 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ube3dQ8BX13 AC116713.1-201ENSMUST00000215074 430 ntBASIC17.91■□□□□ 0.46
Ube3dQ8BX13 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ube3dQ8BX13 Gm9847-201ENSMUST00000052528 599 ntBASIC17.91■□□□□ 0.46
Ube3dQ8BX13 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC17.91■□□□□ 0.46
Ube3dQ8BX13 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ube3dQ8BX13 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ube3dQ8BX13 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ube3dQ8BX13 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ube3dQ8BX13 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Ube3dQ8BX13 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ube3dQ8BX13 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ube3dQ8BX13 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ube3dQ8BX13 Gm13241-201ENSMUST00000094493 780 ntBASIC17.9■□□□□ 0.46
Ube3dQ8BX13 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Ube3dQ8BX13 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Ube3dQ8BX13 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ube3dQ8BX13 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ube3dQ8BX13 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ube3dQ8BX13 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ube3dQ8BX13 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Ube3dQ8BX13 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Ube3dQ8BX13 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.89■□□□□ 0.45
Ube3dQ8BX13 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms