Protein–RNA interactions for Protein: Q80VM9

Otop1, Otopetrin-1, mousemouse

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otop1Q80VM9 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Otop1Q80VM9 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Otop1Q80VM9 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Otop1Q80VM9 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.51■□□□□ 0.71
Otop1Q80VM9 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.51■□□□□ 0.71
Otop1Q80VM9 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.51■□□□□ 0.71
Otop1Q80VM9 Spcs1-204ENSMUST00000226782 949 ntBASIC19.51■□□□□ 0.71
Otop1Q80VM9 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Otop1Q80VM9 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Otop1Q80VM9 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Otop1Q80VM9 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
Otop1Q80VM9 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Otop1Q80VM9 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.51■□□□□ 0.71
Otop1Q80VM9 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Otop1Q80VM9 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Otop1Q80VM9 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Otop1Q80VM9 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Otop1Q80VM9 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Otop1Q80VM9 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Otop1Q80VM9 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Otop1Q80VM9 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Otop1Q80VM9 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Otop1Q80VM9 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Otop1Q80VM9 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Otop1Q80VM9 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Otop1Q80VM9 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
Otop1Q80VM9 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Otop1Q80VM9 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.5■□□□□ 0.71
Otop1Q80VM9 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Otop1Q80VM9 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Otop1Q80VM9 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Otop1Q80VM9 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.49■□□□□ 0.71
Otop1Q80VM9 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Otop1Q80VM9 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Otop1Q80VM9 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Otop1Q80VM9 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Otop1Q80VM9 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
Otop1Q80VM9 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Otop1Q80VM9 Gm10849-201ENSMUST00000100397 618 ntBASIC19.48■□□□□ 0.71
Otop1Q80VM9 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.48■□□□□ 0.71
Otop1Q80VM9 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Otop1Q80VM9 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.48■□□□□ 0.71
Otop1Q80VM9 Gm37179-201ENSMUST00000194862 823 ntBASIC19.48■□□□□ 0.71
Otop1Q80VM9 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Otop1Q80VM9 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Otop1Q80VM9 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Otop1Q80VM9 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Otop1Q80VM9 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Otop1Q80VM9 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Otop1Q80VM9 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Otop1Q80VM9 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Otop1Q80VM9 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Otop1Q80VM9 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Otop1Q80VM9 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Otop1Q80VM9 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.47■□□□□ 0.71
Otop1Q80VM9 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Otop1Q80VM9 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Otop1Q80VM9 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Otop1Q80VM9 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Otop1Q80VM9 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Otop1Q80VM9 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Otop1Q80VM9 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Otop1Q80VM9 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Otop1Q80VM9 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.46■□□□□ 0.71
Otop1Q80VM9 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Otop1Q80VM9 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.46■□□□□ 0.71
Otop1Q80VM9 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Otop1Q80VM9 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Otop1Q80VM9 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Otop1Q80VM9 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.46■□□□□ 0.71
Otop1Q80VM9 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.46■□□□□ 0.71
Otop1Q80VM9 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Otop1Q80VM9 Gm40848-201ENSMUST00000221998 324 ntBASIC19.46■□□□□ 0.71
Otop1Q80VM9 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.71
Otop1Q80VM9 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Otop1Q80VM9 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Otop1Q80VM9 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Otop1Q80VM9 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Otop1Q80VM9 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Otop1Q80VM9 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Otop1Q80VM9 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Otop1Q80VM9 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Otop1Q80VM9 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.45■□□□□ 0.7
Otop1Q80VM9 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Otop1Q80VM9 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Otop1Q80VM9 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Otop1Q80VM9 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Otop1Q80VM9 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Otop1Q80VM9 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Otop1Q80VM9 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Otop1Q80VM9 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Otop1Q80VM9 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Otop1Q80VM9 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.44■□□□□ 0.7
Otop1Q80VM9 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Otop1Q80VM9 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Otop1Q80VM9 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Otop1Q80VM9 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.44■□□□□ 0.7
Otop1Q80VM9 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Otop1Q80VM9 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Otop1Q80VM9 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms