Protein–RNA interactions for Protein: Q7TQK4

Exosc3, Exosome complex component RRP40, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Exosc3Q7TQK4 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Exosc3Q7TQK4 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.71■□□□□ 0.59
Exosc3Q7TQK4 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Exosc3Q7TQK4 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Exosc3Q7TQK4 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.71■□□□□ 0.59
Exosc3Q7TQK4 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Exosc3Q7TQK4 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Exosc3Q7TQK4 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Exosc3Q7TQK4 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.71■□□□□ 0.59
Exosc3Q7TQK4 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Exosc3Q7TQK4 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Exosc3Q7TQK4 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Exosc3Q7TQK4 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Exosc3Q7TQK4 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Exosc3Q7TQK4 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Exosc3Q7TQK4 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Exosc3Q7TQK4 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.7■□□□□ 0.58
Exosc3Q7TQK4 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Exosc3Q7TQK4 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.7■□□□□ 0.58
Exosc3Q7TQK4 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Exosc3Q7TQK4 Gm43530-201ENSMUST00000195920 274 ntBASIC18.7■□□□□ 0.58
Exosc3Q7TQK4 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Exosc3Q7TQK4 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Exosc3Q7TQK4 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Exosc3Q7TQK4 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Exosc3Q7TQK4 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Exosc3Q7TQK4 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Exosc3Q7TQK4 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.69■□□□□ 0.58
Exosc3Q7TQK4 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.69■□□□□ 0.58
Exosc3Q7TQK4 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Exosc3Q7TQK4 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.69■□□□□ 0.58
Exosc3Q7TQK4 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Exosc3Q7TQK4 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Exosc3Q7TQK4 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Exosc3Q7TQK4 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Exosc3Q7TQK4 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Exosc3Q7TQK4 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
Exosc3Q7TQK4 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Exosc3Q7TQK4 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.68■□□□□ 0.58
Exosc3Q7TQK4 Golgb1-201ENSMUST00000023534 498 ntBASIC18.68■□□□□ 0.58
Exosc3Q7TQK4 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Exosc3Q7TQK4 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Exosc3Q7TQK4 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Exosc3Q7TQK4 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Exosc3Q7TQK4 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Exosc3Q7TQK4 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Exosc3Q7TQK4 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Exosc3Q7TQK4 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Exosc3Q7TQK4 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Exosc3Q7TQK4 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Exosc3Q7TQK4 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Exosc3Q7TQK4 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Exosc3Q7TQK4 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Exosc3Q7TQK4 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Exosc3Q7TQK4 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.67■□□□□ 0.58
Exosc3Q7TQK4 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.67■□□□□ 0.58
Exosc3Q7TQK4 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Exosc3Q7TQK4 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Exosc3Q7TQK4 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Exosc3Q7TQK4 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Exosc3Q7TQK4 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Exosc3Q7TQK4 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Exosc3Q7TQK4 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Exosc3Q7TQK4 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
Exosc3Q7TQK4 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Exosc3Q7TQK4 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Exosc3Q7TQK4 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Exosc3Q7TQK4 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Exosc3Q7TQK4 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Exosc3Q7TQK4 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Exosc3Q7TQK4 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Exosc3Q7TQK4 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Exosc3Q7TQK4 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Exosc3Q7TQK4 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
Exosc3Q7TQK4 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Exosc3Q7TQK4 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Exosc3Q7TQK4 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Exosc3Q7TQK4 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Exosc3Q7TQK4 Gm9847-201ENSMUST00000052528 599 ntBASIC18.65■□□□□ 0.58
Exosc3Q7TQK4 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Exosc3Q7TQK4 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Exosc3Q7TQK4 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Exosc3Q7TQK4 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Exosc3Q7TQK4 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Exosc3Q7TQK4 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Exosc3Q7TQK4 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Exosc3Q7TQK4 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Exosc3Q7TQK4 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.63■□□□□ 0.57
Exosc3Q7TQK4 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
Exosc3Q7TQK4 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Exosc3Q7TQK4 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Exosc3Q7TQK4 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Exosc3Q7TQK4 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.63■□□□□ 0.57
Exosc3Q7TQK4 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Exosc3Q7TQK4 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.63■□□□□ 0.57
Exosc3Q7TQK4 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Exosc3Q7TQK4 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Exosc3Q7TQK4 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.63■□□□□ 0.57
Exosc3Q7TQK4 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Exosc3Q7TQK4 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms