Protein–RNA interactions for Protein: Q3UHJ8

Rnf44, RING finger protein 44, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf44Q3UHJ8 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf44Q3UHJ8 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf44Q3UHJ8 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf44Q3UHJ8 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf44Q3UHJ8 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf44Q3UHJ8 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf44Q3UHJ8 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf44Q3UHJ8 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
Rnf44Q3UHJ8 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Rnf44Q3UHJ8 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf44Q3UHJ8 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf44Q3UHJ8 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf44Q3UHJ8 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf44Q3UHJ8 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf44Q3UHJ8 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf44Q3UHJ8 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf44Q3UHJ8 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf44Q3UHJ8 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.62■□□□□ 0.73
Rnf44Q3UHJ8 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.62■□□□□ 0.73
Rnf44Q3UHJ8 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf44Q3UHJ8 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf44Q3UHJ8 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf44Q3UHJ8 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf44Q3UHJ8 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf44Q3UHJ8 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf44Q3UHJ8 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf44Q3UHJ8 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf44Q3UHJ8 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Rnf44Q3UHJ8 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf44Q3UHJ8 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf44Q3UHJ8 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf44Q3UHJ8 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.61■□□□□ 0.73
Rnf44Q3UHJ8 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.61■□□□□ 0.73
Rnf44Q3UHJ8 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.61■□□□□ 0.73
Rnf44Q3UHJ8 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.61■□□□□ 0.73
Rnf44Q3UHJ8 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.61■□□□□ 0.73
Rnf44Q3UHJ8 Golgb1-201ENSMUST00000023534 498 ntBASIC19.61■□□□□ 0.73
Rnf44Q3UHJ8 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf44Q3UHJ8 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Rnf44Q3UHJ8 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf44Q3UHJ8 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf44Q3UHJ8 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf44Q3UHJ8 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf44Q3UHJ8 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf44Q3UHJ8 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf44Q3UHJ8 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.61■□□□□ 0.73
Rnf44Q3UHJ8 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf44Q3UHJ8 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf44Q3UHJ8 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf44Q3UHJ8 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf44Q3UHJ8 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.6■□□□□ 0.73
Rnf44Q3UHJ8 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf44Q3UHJ8 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.6■□□□□ 0.73
Rnf44Q3UHJ8 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.6■□□□□ 0.73
Rnf44Q3UHJ8 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf44Q3UHJ8 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf44Q3UHJ8 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf44Q3UHJ8 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf44Q3UHJ8 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf44Q3UHJ8 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Rnf44Q3UHJ8 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf44Q3UHJ8 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf44Q3UHJ8 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf44Q3UHJ8 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf44Q3UHJ8 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.59■□□□□ 0.73
Rnf44Q3UHJ8 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
Rnf44Q3UHJ8 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf44Q3UHJ8 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf44Q3UHJ8 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf44Q3UHJ8 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf44Q3UHJ8 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Rnf44Q3UHJ8 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rnf44Q3UHJ8 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rnf44Q3UHJ8 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Rnf44Q3UHJ8 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rnf44Q3UHJ8 Gm9847-201ENSMUST00000052528 599 ntBASIC19.58■□□□□ 0.72
Rnf44Q3UHJ8 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rnf44Q3UHJ8 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
Rnf44Q3UHJ8 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rnf44Q3UHJ8 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.57■□□□□ 0.72
Rnf44Q3UHJ8 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.57■□□□□ 0.72
Rnf44Q3UHJ8 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rnf44Q3UHJ8 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.57■□□□□ 0.72
Rnf44Q3UHJ8 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rnf44Q3UHJ8 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rnf44Q3UHJ8 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.57■□□□□ 0.72
Rnf44Q3UHJ8 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf44Q3UHJ8 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf44Q3UHJ8 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Rnf44Q3UHJ8 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf44Q3UHJ8 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf44Q3UHJ8 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf44Q3UHJ8 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Rnf44Q3UHJ8 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf44Q3UHJ8 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf44Q3UHJ8 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Rnf44Q3UHJ8 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf44Q3UHJ8 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf44Q3UHJ8 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf44Q3UHJ8 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms