Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.78■□□□□ 0.92
Mmp13P33435 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Mmp13P33435 Rps24-207ENSMUST00000224568 714 ntBASIC20.78■□□□□ 0.92
Mmp13P33435 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Mmp13P33435 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Mmp13P33435 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Mmp13P33435 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.78■□□□□ 0.92
Mmp13P33435 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.78■□□□□ 0.92
Mmp13P33435 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Mmp13P33435 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Mmp13P33435 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Mmp13P33435 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Mmp13P33435 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.77■□□□□ 0.91
Mmp13P33435 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Mmp13P33435 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Mmp13P33435 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Mmp13P33435 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.76■□□□□ 0.91
Mmp13P33435 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Mmp13P33435 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Mmp13P33435 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Mmp13P33435 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Mmp13P33435 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Mmp13P33435 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Mmp13P33435 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Mmp13P33435 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.75■□□□□ 0.91
Mmp13P33435 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Mmp13P33435 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Mmp13P33435 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Mmp13P33435 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Mmp13P33435 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Mmp13P33435 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.74■□□□□ 0.91
Mmp13P33435 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Mmp13P33435 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Mmp13P33435 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.74■□□□□ 0.91
Mmp13P33435 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Mmp13P33435 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Mmp13P33435 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Mmp13P33435 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Mmp13P33435 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Mmp13P33435 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Mmp13P33435 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Mmp13P33435 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Mmp13P33435 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Mmp13P33435 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Mmp13P33435 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.73■□□□□ 0.91
Mmp13P33435 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.73■□□□□ 0.91
Mmp13P33435 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Mmp13P33435 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Mmp13P33435 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Mmp13P33435 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Mmp13P33435 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Mmp13P33435 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.73■□□□□ 0.91
Mmp13P33435 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Mmp13P33435 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Mmp13P33435 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Mmp13P33435 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Mmp13P33435 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Mmp13P33435 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Mmp13P33435 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.72■□□□□ 0.91
Mmp13P33435 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.72■□□□□ 0.91
Mmp13P33435 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.72■□□□□ 0.91
Mmp13P33435 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Mmp13P33435 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Mmp13P33435 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Mmp13P33435 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Mmp13P33435 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Mmp13P33435 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Mmp13P33435 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Mmp13P33435 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Mmp13P33435 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Mmp13P33435 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Mmp13P33435 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.71■□□□□ 0.91
Mmp13P33435 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
Mmp13P33435 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Mmp13P33435 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Mmp13P33435 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Mmp13P33435 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Mmp13P33435 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Mmp13P33435 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Mmp13P33435 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Mmp13P33435 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.7■□□□□ 0.9
Mmp13P33435 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Mmp13P33435 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.7■□□□□ 0.9
Mmp13P33435 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Mmp13P33435 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.7■□□□□ 0.9
Mmp13P33435 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.7■□□□□ 0.9
Mmp13P33435 Gm9959-201ENSMUST00000068277 390 ntBASIC20.7■□□□□ 0.9
Mmp13P33435 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.7■□□□□ 0.9
Mmp13P33435 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Mmp13P33435 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Mmp13P33435 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Mmp13P33435 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mmp13P33435 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Mmp13P33435 Gm14117-201ENSMUST00000122417 843 ntBASIC20.69■□□□□ 0.9
Mmp13P33435 Etf1-202ENSMUST00000180351 108 ntBASIC20.69■□□□□ 0.9
Mmp13P33435 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.69■□□□□ 0.9
Mmp13P33435 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.69■□□□□ 0.9
Mmp13P33435 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Mmp13P33435 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Mmp13P33435 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms