Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Gm9870-201ENSMUST00000063874 645 ntBASIC20.57■□□□□ 0.88
Rb1P13405 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rb1P13405 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rb1P13405 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rb1P13405 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rb1P13405 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rb1P13405 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rb1P13405 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rb1P13405 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rb1P13405 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rb1P13405 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Rb1P13405 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rb1P13405 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Rb1P13405 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rb1P13405 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rb1P13405 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rb1P13405 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rb1P13405 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.56■□□□□ 0.88
Rb1P13405 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rb1P13405 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rb1P13405 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rb1P13405 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rb1P13405 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rb1P13405 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rb1P13405 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rb1P13405 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Rb1P13405 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rb1P13405 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rb1P13405 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rb1P13405 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rb1P13405 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.54■□□□□ 0.88
Rb1P13405 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Rb1P13405 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rb1P13405 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rb1P13405 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rb1P13405 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rb1P13405 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rb1P13405 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rb1P13405 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Rb1P13405 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.53■□□□□ 0.88
Rb1P13405 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rb1P13405 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Rb1P13405 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rb1P13405 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.53■□□□□ 0.88
Rb1P13405 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rb1P13405 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rb1P13405 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rb1P13405 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rb1P13405 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rb1P13405 Gm6139-201ENSMUST00000079261 882 ntBASIC20.52■□□□□ 0.88
Rb1P13405 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Rb1P13405 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Rb1P13405 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Rb1P13405 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.52■□□□□ 0.87
Rb1P13405 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
Rb1P13405 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rb1P13405 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rb1P13405 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rb1P13405 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.51■□□□□ 0.87
Rb1P13405 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rb1P13405 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.51■□□□□ 0.87
Rb1P13405 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rb1P13405 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rb1P13405 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rb1P13405 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rb1P13405 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Rb1P13405 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rb1P13405 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.5■□□□□ 0.87
Rb1P13405 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.5■□□□□ 0.87
Rb1P13405 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Rb1P13405 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rb1P13405 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
Rb1P13405 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.5■□□□□ 0.87
Rb1P13405 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rb1P13405 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Rb1P13405 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Rb1P13405 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rb1P13405 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.49■□□□□ 0.87
Rb1P13405 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rb1P13405 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
Rb1P13405 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rb1P13405 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rb1P13405 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rb1P13405 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Rb1P13405 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.48■□□□□ 0.87
Rb1P13405 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rb1P13405 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rb1P13405 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rb1P13405 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.48■□□□□ 0.87
Rb1P13405 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.47■□□□□ 0.87
Rb1P13405 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Rb1P13405 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rb1P13405 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.47■□□□□ 0.87
Rb1P13405 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.47■□□□□ 0.87
Rb1P13405 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.47■□□□□ 0.87
Rb1P13405 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.47■□□□□ 0.87
Rb1P13405 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Rb1P13405 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rb1P13405 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rb1P13405 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms