Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
ApoeP08226 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
ApoeP08226 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ApoeP08226 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ApoeP08226 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ApoeP08226 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ApoeP08226 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ApoeP08226 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ApoeP08226 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ApoeP08226 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ApoeP08226 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.2■□□□□ 0.66
ApoeP08226 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ApoeP08226 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
ApoeP08226 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ApoeP08226 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.2■□□□□ 0.66
ApoeP08226 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ApoeP08226 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ApoeP08226 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ApoeP08226 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ApoeP08226 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.2■□□□□ 0.66
ApoeP08226 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ApoeP08226 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
ApoeP08226 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.19■□□□□ 0.66
ApoeP08226 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ApoeP08226 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ApoeP08226 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
ApoeP08226 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
ApoeP08226 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ApoeP08226 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ApoeP08226 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ApoeP08226 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ApoeP08226 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.19■□□□□ 0.66
ApoeP08226 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ApoeP08226 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ApoeP08226 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
ApoeP08226 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ApoeP08226 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ApoeP08226 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
ApoeP08226 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ApoeP08226 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.17■□□□□ 0.66
ApoeP08226 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ApoeP08226 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ApoeP08226 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ApoeP08226 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.17■□□□□ 0.66
ApoeP08226 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
ApoeP08226 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.17■□□□□ 0.66
ApoeP08226 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ApoeP08226 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
ApoeP08226 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ApoeP08226 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ApoeP08226 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.16■□□□□ 0.66
ApoeP08226 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ApoeP08226 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ApoeP08226 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.16■□□□□ 0.66
ApoeP08226 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.16■□□□□ 0.66
ApoeP08226 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ApoeP08226 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
ApoeP08226 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ApoeP08226 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ApoeP08226 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ApoeP08226 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
ApoeP08226 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ApoeP08226 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
ApoeP08226 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ApoeP08226 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ApoeP08226 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ApoeP08226 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
ApoeP08226 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ApoeP08226 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ApoeP08226 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
ApoeP08226 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
ApoeP08226 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ApoeP08226 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ApoeP08226 Gm14523-201ENSMUST00000117260 558 ntBASIC19.14■□□□□ 0.65
ApoeP08226 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ApoeP08226 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ApoeP08226 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ApoeP08226 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ApoeP08226 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.14■□□□□ 0.65
ApoeP08226 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ApoeP08226 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
ApoeP08226 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ApoeP08226 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.14■□□□□ 0.65
ApoeP08226 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.14■□□□□ 0.65
ApoeP08226 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ApoeP08226 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
ApoeP08226 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ApoeP08226 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ApoeP08226 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ApoeP08226 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC19.13■□□□□ 0.65
ApoeP08226 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ApoeP08226 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ApoeP08226 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
ApoeP08226 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
ApoeP08226 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ApoeP08226 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ApoeP08226 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
ApoeP08226 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ApoeP08226 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
ApoeP08226 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms